| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0148 |
|---|
| Symbol | |
|---|
| ID | 5706588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 160093 |
|---|
| End bp | 161385 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641269674 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001535074 |
|---|
| Protein GI | 159035821 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000426829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAACA TCCGGCGGGT CGCGGTCATC GGCGGCAACC GCATCCCCTT CGCCCGCTCC
AACTCACGGT ACGCCGAAGC GTCCAACGCG GACCTGCTCG GCGCGGCCCT CGACGGGCTG
GTCGCCCGGT ACGGGCTGGC CGGCCAGCAG GTCGGCGAGG TGGTGGCGGG TGCCGTGCTG
AAGCACTCCC GGGACTACAA CCTGACCCGC GAGGTGGTGC TCGGCTCGAC GCTCGACCCA
CACACCCCCG CGTACGACAT CCAGCAGGCA TGCGGCACCG GCCTGGAGGC AGCCATCCTG
GTCGCCAACA AGATTGCGCT GGGGCAACTC GACGTGGGCA TCGCCGGTGG TGTCGACACC
ACGTCCGATG CGCCGCTTGC GGTGAACGAG GAGATGCGGC GCACGCTGCT CACCCTCAAC
ACTGCCCGCA CCCTCGGGGA ACGGCTGCGG ATCGCCGCGC GGCTGCGCCC CTCGCAACCG
TTCCGGCCGG AGATTCCGCG CAACGCCGAG CCCCGCACCG GGCTGTCCAT GGGAGAGCAT
GCCGCCCGCA CCGCCGTCCA CTGGCAGGTC GACCGGCGGT CGCAGGACGA GCTGGCCCTG
CGGTCGCACC ACCGGCTGGC CGCCGCGTAC GAGCGTGGGT TCTTCGACGA CCTGATGACG
CCGTACCTCG GGTTGACCCG GGACCAGAAC CTGCGCCCGG ACACCAGCCT GGAGAAGCTC
GGCGGCCTCC GCCCGGTCTT CGGGACGAAG GGGCCGGACG CCGAGCAGGC GACCATGACC
GCCGGCAACT CGTCGCCGCT GACCGACGGC GCGTCGACCG TGCTGCTCGC CAGTGAGGAG
TGGGCGCAGG CGCACAGCCT GCCGGTGCAG GCGTGGTTCA CCTGGTCGCA GACCGCCGCC
GTGGACTTCG TGCCCGGTGA GGAAGGGCTG TTGATGGCCC CCGCGTACGC GGTGCCCCGG
ATGCTGGCCC GCGCCGGGCT GACCCTCCAG GACTTCGACT TCTACGAGAT CCACGAGGCG
TTCGCCGCGC AGGTCCTGGC CACTCTGGCT GCCTGGGAGT CGCCGGAGTT CTGCAGGGAC
CGGCTCGGCC TGGACGCCCC GCTCGGAGCG ATCGACCCGG ACCGGATCAA CGTCAACGGC
TCGTCGCTGG CCGCCGGGCA CCCGTTCGCC GCGACCGGCG GCCGGATCGT GGCGACCCTG
GCCAAGCTGC TCGCCGAGCG AGGTGGCGGC CGAGGGCTCA TCTCGATCTG CGCCGCGGGC
GGGCAGGGCG TCACGGCGAT CCTGGAGCGT TGA
|
|---|
| Protein sequence | MQNIRRVAVI GGNRIPFARS NSRYAEASNA DLLGAALDGL VARYGLAGQQ VGEVVAGAVL
KHSRDYNLTR EVVLGSTLDP HTPAYDIQQA CGTGLEAAIL VANKIALGQL DVGIAGGVDT
TSDAPLAVNE EMRRTLLTLN TARTLGERLR IAARLRPSQP FRPEIPRNAE PRTGLSMGEH
AARTAVHWQV DRRSQDELAL RSHHRLAAAY ERGFFDDLMT PYLGLTRDQN LRPDTSLEKL
GGLRPVFGTK GPDAEQATMT AGNSSPLTDG ASTVLLASEE WAQAHSLPVQ AWFTWSQTAA
VDFVPGEEGL LMAPAYAVPR MLARAGLTLQ DFDFYEIHEA FAAQVLATLA AWESPEFCRD
RLGLDAPLGA IDPDRINVNG SSLAAGHPFA ATGGRIVATL AKLLAERGGG RGLISICAAG
GQGVTAILER
|
|---|
| |