Gene Sare_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0130 
SymbolpyrE 
ID5706678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp143067 
End bp143606 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content70% 
IMG OID641269656 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001535056 
Protein GI159035803 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000251206 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGGGACC ACGACGACCT GCGTAAATTC ATCACCGACC TGGCAGTGGT CCACGGTCGG 
GTGGTGCTCT CCTCGGGGCG TGCGGCGGAC TGGTATGTGG ACCTGCGGCG CGTAACGCTG
CATCACGAGG CCGCACCGTT GGTGGGTCGG GTGCTGCGGG CGACGACTGC CGACTGGGCG
TACGACGCAG TGGGCGGGCT CACCCTCGGC GCTGACCCGA TCGCGCTGTC GATGCTGCAC
GCCACTGCCG GTACCGACCG TCCGCTGGAC GCCTTCGTAG TCCGGAAGGC GGGTAAGGCG
CACGGGCTGC AGCGCCGGAT CGAGGGGCCT GATGTGGCTG GGCGCCGGGT GCTCGCGGTG
GAGGACACAT CCACCACGGG CCAGAGCGTG TTGACCGCTG TCGAGGCCCT TCGCGAGGCC
GGGGCCGAGG TGGTGGGAGT GGCGGTTATT GTTGATCGAG GTGCCGGGGC CGCGGTGCGA
GCCGCCGGAC TGCCGTACCG GGCGGCCTAT ACGTTGGCTG ACCTCGGCCT TGTGGCGTAA
 
Protein sequence
MGDHDDLRKF ITDLAVVHGR VVLSSGRAAD WYVDLRRVTL HHEAAPLVGR VLRATTADWA 
YDAVGGLTLG ADPIALSMLH ATAGTDRPLD AFVVRKAGKA HGLQRRIEGP DVAGRRVLAV
EDTSTTGQSV LTAVEALREA GAEVVGVAVI VDRGAGAAVR AAGLPYRAAY TLADLGLVA