Gene Sare_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0118 
Symbol 
ID5707046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp131639 
End bp132844 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID641269644 
Productsodium/hydrogen exchanger 
Protein accessionYP_001535044 
Protein GI159035791 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000413782 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCACGACT CCACCACGCT GCTCATCGAA GTCGGAGCGC TCCTGTTCCT GCTCGGCCTG 
CTCGGCCGAC TCGGCCGACG GATCGGGCTC TCGCCGATCC CGCTGTACCT GCTCGCCGGG
CTGCTCTTCG GGCATGGCGG CGTCTTCGGC TTCAAGGCCA GCGAGGAGTT CTTCGCCGTC
GGCGCCGAGA TCGGTGTGAT CCTCCTGCTG GTCATGCTCG GCCTGGAATA CTCCGCCAGC
GAGCTGGTCG GCAACCTCCG CGCCGCGGCA CCGGCCGGGC TGATCGACGG GCTGCTCAAC
GCACTGCCCG GTGCCGCCTT CGCACTGCTG CTCGGTTGGG ACTGGGTGGC TGCCATCGTG
CTCGCCGGCA TCACCTGGAT CTCGTCGTCC GGCGTGATCG CCAAGGTGCT CGGCGATCTG
GGCCGACTCG GTAACCGGGA GACGCCCGTG GTGCTGTCGG TGCTGGTCAT CGAGGACCTG
GCGATGGCCT TCTACCTGCC GCTCCTCACC GCCGTCCTGG CCGGGGCCGG ACTGGTCGCC
GGCGGCGCCG CGCTCGCCGT AGCGGTCGCC ACGGTGCTGG TCGTGCTCGT GGTCGCGATC
CGGTACGGCC GCACCATCTC GAACATCATG TCGGCCCGCG ATCCGGAGGC GCTGCTCCTG
GGTGTGCTCG GCCTGACCCT GCTGGTCGCC GGTGCGGCCG CGAAACTCCA GGTGTCGGCC
GCGGTCGGCG CGTTCCTGGT CGGTATCGCG ATCTCCGGGC CGGTCGCGCA CCACGCCACC
GAGTTGCTGA CCCCGCTGCG GGACCTGTTC GCCGCGGTGT TCTTCCTGTT CTTCGGGCTG
GTCACCGATC CACGCGACAT CCCACCGGTA CTGCTGCCGG CGCTCGCGCT GGCGGTGGTG
ACGATGGGCA CGAAGACGCT CACCGGATAC CTCGCCGCGC GACGGGCCGG CATCGGTGAA
CCCGGTCGCT GGCGGACCGG GCTCACCCTG GTGCCGCGAG GGGAGTTCTC CATCGTCATC
GCCGGGCTGG CGGTGGCGGC GGGAAGCGTC GATCCACAGT TGGCCGCGCT CGCCACGGCG
TACGTGTTGA TCACCGTGGT CGTCGGGCCG ACGCTCGCCC GGGTGCCCGA TCTCGAAGGC
TTCAAGAGCT GGTTGCGGCG ACGTGCGGCC AAACAACAGG CTCGGCCGGC GCCGGTCGGA
GACTGA
 
Protein sequence
MHDSTTLLIE VGALLFLLGL LGRLGRRIGL SPIPLYLLAG LLFGHGGVFG FKASEEFFAV 
GAEIGVILLL VMLGLEYSAS ELVGNLRAAA PAGLIDGLLN ALPGAAFALL LGWDWVAAIV
LAGITWISSS GVIAKVLGDL GRLGNRETPV VLSVLVIEDL AMAFYLPLLT AVLAGAGLVA
GGAALAVAVA TVLVVLVVAI RYGRTISNIM SARDPEALLL GVLGLTLLVA GAAAKLQVSA
AVGAFLVGIA ISGPVAHHAT ELLTPLRDLF AAVFFLFFGL VTDPRDIPPV LLPALALAVV
TMGTKTLTGY LAARRAGIGE PGRWRTGLTL VPRGEFSIVI AGLAVAAGSV DPQLAALATA
YVLITVVVGP TLARVPDLEG FKSWLRRRAA KQQARPAPVG D