| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0089 |
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| Symbol | |
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| ID | 5707059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 102219 |
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| End bp | 103157 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269615 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001535015 |
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| Protein GI | 159035762 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00450491 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACACAG TCGTCGTCCT CGCGCTGCCG GATGTGATTG CCTTTGATCT GGCCACACCG
GTCGAGACGT TCGGCCGTGT CCGCCTGCCG GACGGCCGGC CCGGATACCG GGTCCTCGTC
GCAGGGCCCG ACGATGTCGT CGACGCCGGG CCGGTGCGGC TGGCAGTCAG CGAGCAGCTG
GATGCGCTCG ATCGCGCCGA CCTGGTCGTG GTGCCTGGCC GCAACAACCC CTTACGGCCC
TCCCCACCCT CGGTGCTCGC CGCCCTGCGT GCTGCCGCGA CCAGGGGCAC ACGCGTCGCC
TCCATCTGCG TCGGAGCATT CACGCTGGCA GAAGCAGGAC TACTCGACAA CATGAGGGCC
ACGACCCACT GGCTCGCCGC CGAACACCTC GCGCACCAAC ACCCGTCGAT CCAGGTGGAC
CCCGACGTGC TCTACATCGA CAACGGCAGC ATTCTCACCT CTGCCGGTGC CGCGTCCGGG
CTGGACCTGT GCCTGCACGT GATCCACACC GACTACGGTG CGGCGGTGGC CGCGGATGCC
GCACGCCTCG CCGTGGCCCC ACTGCACCGA GCCGGTGGGC AGGCGCAGTA CATCCTGCGG
AACCGGCCGC CCCTGCGGAC CTCAGTCCTC GAACCCGTCC TCGCCTGGAT CGAGACCAAC
GCGCATCGGG CCCTCACGCT CGCCGACCTC GCCGCCGCCG CGAACCTGAG CACACGCACC
CTGACCAGGC GATTCGCTGT CGAGACCGGA CAGAGCCCGA TGCAATGGGT CGCCGGCGTC
CGGATTCGTC ACGCCCAGGA GCTCCTGGAG ACCACCGACT ACACGATCGA CCGCATCGCA
AACCAGACCG GATTCACCAC CACGAGCAAC TTCCGTGCGC AGTTCCAGGA GGTCGTCGGC
ACCACACCAG GCGCCTATCG CACCACCTTC CGGCTGTGA
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| Protein sequence | MYTVVVLALP DVIAFDLATP VETFGRVRLP DGRPGYRVLV AGPDDVVDAG PVRLAVSEQL
DALDRADLVV VPGRNNPLRP SPPSVLAALR AAATRGTRVA SICVGAFTLA EAGLLDNMRA
TTHWLAAEHL AHQHPSIQVD PDVLYIDNGS ILTSAGAASG LDLCLHVIHT DYGAAVAADA
ARLAVAPLHR AGGQAQYILR NRPPLRTSVL EPVLAWIETN AHRALTLADL AAAANLSTRT
LTRRFAVETG QSPMQWVAGV RIRHAQELLE TTDYTIDRIA NQTGFTTTSN FRAQFQEVVG
TTPGAYRTTF RL
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