Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0086 |
Symbol | |
ID | 5707091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 99175 |
End bp | 101028 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269612 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001535012 |
Protein GI | 159035759 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0567626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACT ACAAGAGCAA CCTTCGGGAC CTCGAGTTCA ACCTGTTTGA GGTATTCGGG GCGGACCGGA CGTTCAGCCA GGCTCCATAC ACGGAGCTGG ACGTCGACAC CGCCCGTAGT TTTCTCTCCG AGGTCGACCG CCTGGCCCGG GAGGACCTGG CGGCCAGCTA CACGGACAGC GACCGTAACC CGCCGGTGTT CGACCCGGCG ACACACACCG CGCCACTGCC GGAGCCGTTC AAGAAGTCGT ACCAGAGGTT CATGGACTCC GAGTTCTGGC GGCTGGACCT ACCCGAGGCA CTTGGGGGCA GCAACGCCCC CCGCGCCCTC TGGTGGTCGC TGGCCGAACT CGTCCTGGGT GCCAACGCAC CGGTCTGGAT GTATGCCTCA GGCCCGTCCT TCGCACACGT ACTGCACGTC GAGGGCACCG AGCGGCAGCG GAAGTGGGCC AAGCTGTTCA TCGACCGGGG CTGGGGCTCC ACGATGGTGC TGACCGAGGC GGATGCCGGC TCGGACGTTG GCGCCGGCCG CGCCCGTGCC ATTCCACAGC CGGACGGCTC GTGGCACATC GAGGGCGTCA AGCGTTTCAT CACCTCCGGC GAGCACGACC TCGGTGACAA CATCGTCCAC TATGTGCTGG CCCGTCCGGT CGGCGTCGAG GGTGTGGGCG GACCGGGCAC CAAGGGTCTG TCCCTGTTCG TCGTGCCGAA GTACCACTTC GACGAGGACA CCGGCGAGCT GGGCGAGCGC AACGGGGTCT TCGCCACCAA CGTCGAGCAC AAAATGGGTC TGAAGGTCTC GAACACCTGC GAACTGACCT TCGGCGAGCA CGGCGTGCCG GCCCAGGGCT GGCTGCTGGG CGACAAGCAC GACGGCATCC GGCAGATGTT CATGATCATT GAGTACGCCC GGATGATGGT CGGTACGAAG GCGATCGCCA CTCTCTCCAC CGGTTACCTG AACGCGCTCG AGTACGCCAA GAACCGGGTG CAGGGCGCCG ACCTGACCCA GATGACCGAC AAGAGCGCCC CGCGGGTCGC GATCACCCGG CATCCGGACG TGCGCCGTTC GCTGCTGCTG CAGAAGTCGT ACGCCGAAGG GCTGCGGGCC CTGGTCTGCT ACACCGCCAC CTGGCAGGAC AAGGTCGCCA TCGCCACGGC GGCCGGCGAC GAGAAGGCCG TCAAGCTGGC CAAGCGGGTC AACGACCTGC TGCTGCCGCT GGTCAAGGGG GTCGGCTCGG AGCGGGCGTA CGAGTTGCTC GGCCACGAGT CGCTGCAGAC CTTCGGTGGC TCCGGCTTCC TCCAGGACTA CCCGCTGGAG CAGTACGTCC GAGATGCCAA GATCGACACA CTCTACGAGG GCACCACGGC GATCCAGAGC CTCGACCTGA TCTTCCGAAA GGTCGTCCGG GACAACGGCA AGGCCCTGCT GGCGGTCGCC GGCGAGATCC AGGAGTTCAT CTCGACCGAG GGTGGCAATG GCCAGCTCAA GGAGGAGCGG CAGGCGCTCG GCCGCGCCCT CGCCGAGGTC CAGAGCATCC TCGGCACGCT GACCGGCTGG CTGGGCGAGG CGCAGGGCGG TAACACCCAG GCGCTGTACC AGGTCGGGCT CAGCAGCCGC CGGTTCCTGC TGGCGGTCGG CGACCTGGTC GTGGGCTGGC TGCTGCAGCG GCAGGCTGAC GTGGCGCTGA CGGCGCTCAC CGCCGACGGG TCCGCCGATC GGGAGTTCTA CACCGGCAAG GTGGCCGCCG CCCGGTTCTT CGCCCGTGAG GTGCTCCCGC GCATCGGTGC CGACCGGCGC ATCATCGAAA ACGCCGACCC GGGCATCATG GACCTCCCGG AGGAGGCGTT CTGA
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Protein sequence | MTHYKSNLRD LEFNLFEVFG ADRTFSQAPY TELDVDTARS FLSEVDRLAR EDLAASYTDS DRNPPVFDPA THTAPLPEPF KKSYQRFMDS EFWRLDLPEA LGGSNAPRAL WWSLAELVLG ANAPVWMYAS GPSFAHVLHV EGTERQRKWA KLFIDRGWGS TMVLTEADAG SDVGAGRARA IPQPDGSWHI EGVKRFITSG EHDLGDNIVH YVLARPVGVE GVGGPGTKGL SLFVVPKYHF DEDTGELGER NGVFATNVEH KMGLKVSNTC ELTFGEHGVP AQGWLLGDKH DGIRQMFMII EYARMMVGTK AIATLSTGYL NALEYAKNRV QGADLTQMTD KSAPRVAITR HPDVRRSLLL QKSYAEGLRA LVCYTATWQD KVAIATAAGD EKAVKLAKRV NDLLLPLVKG VGSERAYELL GHESLQTFGG SGFLQDYPLE QYVRDAKIDT LYEGTTAIQS LDLIFRKVVR DNGKALLAVA GEIQEFISTE GGNGQLKEER QALGRALAEV QSILGTLTGW LGEAQGGNTQ ALYQVGLSSR RFLLAVGDLV VGWLLQRQAD VALTALTADG SADREFYTGK VAAARFFARE VLPRIGADRR IIENADPGIM DLPEEAF
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