Gene Sare_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0030 
Symbol 
ID5707331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp35894 
End bp36475 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content71% 
IMG OID641269555 
ProductTetR family transcriptional regulator 
Protein accessionYP_001534957 
Protein GI159035704 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.19641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG GCCGACGCCG GTCCCGCAAG GACGAGATCC TGGAGATCGC GGTCGGGTTG 
TTTGCTGCCC GGGGTTACCA CGGCGTGTCG ATGGATGACA TCGGTGCCGC CGCCGGGGTC 
ACCGGGCCGG CGCTCTACCA CCATTTCGCC GGCAAGGAGG CGATGCTGGT CGCCGCGCTG 
GTTCCGGTCA GCGAAGGGCT GCTCGCCGGC GGACAGGAGC GGGCCGCGGC CCACCCCGAC 
GATCCACACG CCGCGTTGGA GTCGCTGATC GATTTCCATG TCGACTTCGC GTTGGCCCAG 
CCGGCGGTGA TCGCCCTGCA CCTGCACGAG TTGGACCGGC TGCCTGACCA GCCGCGTCGC 
CGTATCCGCC GGCTCCAACG GCTGTACGTC GAAGAGTGGG TGAGTGTGCT GACCGCAGCG 
CACCCAGGCT TGCCCGACGG CGAGGCGCGG GTGCTGGCCC ACGCCGCCTT CGGGCTGATG 
AACTCGACCC CGTTCCTCGG CGGCGAGGTG AACCGACAGC GCCGGGCCGA GCTGCTCCGA 
GGCGCGACGC TGGCGGCCCT GCTGGCGCCG ACAGCACGCT GA
 
Protein sequence
MGSGRRRSRK DEILEIAVGL FAARGYHGVS MDDIGAAAGV TGPALYHHFA GKEAMLVAAL 
VPVSEGLLAG GQERAAAHPD DPHAALESLI DFHVDFALAQ PAVIALHLHE LDRLPDQPRR 
RIRRLQRLYV EEWVSVLTAA HPGLPDGEAR VLAHAAFGLM NSTPFLGGEV NRQRRAELLR 
GATLAALLAP TAR