| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0027 |
|---|
| Symbol | |
|---|
| ID | 5707328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 32505 |
|---|
| End bp | 33272 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641269552 |
|---|
| Product | GDSL family lipase |
|---|
| Protein accession | YP_001534954 |
|---|
| Protein GI | 159035701 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCTGGC GCAGTTTCGT GGCGGTCGGG GACAGCTTCA CCGAGGGGCT GAACGACGTG
TACCCAGAGG GCGGCTACCG GGGCTGGGCC GACCTGGTGG CCACCCGGCT CGCCGCTGAG
GTCGGTCCAG ACTTCCGGTA CGCGAACCTC GCTATTCGCG GCCGGCTCTT CCCCCGGGTG
GTGGACGAGC AGGTTCCCGC GGCACTGGCG ATGCAGCCGG ATCTGATCAG CTTCGCAGCG
GGTGGCAACG ACGTGCTGCG GCGAACGTTC GATCCGGACG ACATGATCGC GCGGTTCAAC
GACGTGGTGG GGCGGCTCCG CTCCGGCGGC TCCGACGTGG TCCTGTTCCG GTTCGCCGAC
GTGATGGCCC GCCTGCCTGG GCAGCGGCTG GTCGCCCCCC GGGTACGGCT ACTCAATCAG
GCCGTCGGTG AGACCGCGCA ACGGCACGGG GCGATCCTGG TCGACCTGTA CGCCGACGAC
ACGTACCTGA ACCCGATGTT GTGGAGCACC GATCGGCTGC ACCTCTCCTC GGCCGGGCAC
CGCCGGGTGG CCGCTCAGGT GCTGACCGCG TTGGGGGTCA GTTGCGCCGA GGAGTGGCTG
CTGGTCCCCG AGCGTCCACT GCCCAAGCCG TGGCTGACGG CCCGTACCGA CGATCTCCGC
TGGGCCGCCC ACCACCTGGC TCCCTGGCTC ACCCGTCGCC TCACCGGCCG CAGCTCCGGC
GACACGGTCA CGGCCAAACG CCCCACCCTG AGCCCGCTGA CGGACTGA
|
|---|
| Protein sequence | MGWRSFVAVG DSFTEGLNDV YPEGGYRGWA DLVATRLAAE VGPDFRYANL AIRGRLFPRV
VDEQVPAALA MQPDLISFAA GGNDVLRRTF DPDDMIARFN DVVGRLRSGG SDVVLFRFAD
VMARLPGQRL VAPRVRLLNQ AVGETAQRHG AILVDLYADD TYLNPMLWST DRLHLSSAGH
RRVAAQVLTA LGVSCAEEWL LVPERPLPKP WLTARTDDLR WAAHHLAPWL TRRLTGRSSG
DTVTAKRPTL SPLTD
|
|---|
| |