Gene Sare_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0005 
Symbol 
ID5707578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5889 
End bp6494 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content77% 
IMG OID641269528 
Producthypothetical protein 
Protein accessionYP_001534932 
Protein GI159035679 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000127236 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGCCTGATG ACGCTGTGTC GGCCGCGGAT CCGTGCCGGC ACTTGGGGCC CGGCGCGGAC 
GGGGGAGCCG TGACGCCCGC CGGCGTGGAG GGACTGCCGG CCGGCGCGTC CGGGCCGCAG
CTCGCGCGGG CCGTGCTGGA CGCGGCGAAG GCGCGCCGGT CGGTGGCGCA GCCGCAGCGG
CGCAGCGTGC GCGGTGGTCC GAGCGGTGGC GGGCGACGGC CACGGGGTTA CTCCGGCCCG
GGGCCGGATC CACGCGACCC ACAGCCCCTC GGCGCGGTGT TGGACCGCCT GGTCAAGGCC
CGCGGGTGGC AGCAACCGGC GGCCGAGGCG ACGGTCTTCG GCGCCTGGGA ACGGGTGGTC
GGCCCGGAGG TGGCCCAGCA CAGCCGACCG GTGAAGCTGG ACAACGGTGA GCTGACCGTG
GAGGCGCGCT CGACTGCCTG GGCCACCCAG CTTCGGCTGC TCGCCGGCTC GCTCCTTCAG
CAGATCGCCC GCGAGGTGGG CCACAACGTC GTACGTCGGC TGCACATCCA CGGTCCGGCC
GCGCCGTCCT GGTCGCGTGG GCCCCGTCGG GTGCGCGGCC GCGGCCCCCG GGACACCTAC
GGCTGA
 
Protein sequence
MPDDAVSAAD PCRHLGPGAD GGAVTPAGVE GLPAGASGPQ LARAVLDAAK ARRSVAQPQR 
RSVRGGPSGG GRRPRGYSGP GPDPRDPQPL GAVLDRLVKA RGWQQPAAEA TVFGAWERVV
GPEVAQHSRP VKLDNGELTV EARSTAWATQ LRLLAGSLLQ QIAREVGHNV VRRLHIHGPA
APSWSRGPRR VRGRGPRDTY G