| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3589 |
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| Symbol | |
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| ID | 5713820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3779003 |
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| End bp | 3779614 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269518 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001534923 |
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| Protein GI | 159046129 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATC ATTTGCATTC ACATGACCTG CCCGACGGGC TGGACCTCGG CCCCGTTGTG
GCGATCGACA CCGAAACGAT GGGGTTGGTG CCGGCGCGTG ACCGGCTCTG CGTGGTACAA
CTGTCGTCCG GGGACGGGGA CGCGCATATG GTGCAGATCG CCCAGGGACA GACCGAGGCC
CCGAACCTGA CCCGGATGCT GACCGATCCC AAGGTGCTGA AGCTGTTTCA CTATGCCCGG
TTCGACGTCG CGGCCCTGGA AAACGCGTTC GGGGTGCGGA CCGCACCGAT CTATTGCACC
AAGATCGCCT CGAAACTGGT GCGCACCTAT ACGGACCGGC ACGGGTTGAA GGCGCTGCTC
AGCGAGGTGC TGGGCGTCGA TGTGTCCAAG GCGCAGCAAA GTTCGGACTG GGGGGCGCCG
ACCCTGTCGG CGGCGCAGCT GGATTATGCG GCGTCGGACG TTCTGTACCT TCACCGGTTG
AAAGAGGCGC TGGACGGGAT GCTGGCGCGC GAGGGGCGGA CAGAGCTGGC GCAAGCCTGT
TTCGAGTTCC TGCCCACGCG CGCCCGGCTC GATCTGGGCG GCTGGTCCGA GATCGACATT
TTCCATCACT GA
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| Protein sequence | MTNHLHSHDL PDGLDLGPVV AIDTETMGLV PARDRLCVVQ LSSGDGDAHM VQIAQGQTEA
PNLTRMLTDP KVLKLFHYAR FDVAALENAF GVRTAPIYCT KIASKLVRTY TDRHGLKALL
SEVLGVDVSK AQQSSDWGAP TLSAAQLDYA ASDVLYLHRL KEALDGMLAR EGRTELAQAC
FEFLPTRARL DLGGWSEIDI FHH
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