| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3571 |
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| Symbol | dnaK |
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| ID | 5713802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3760594 |
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| End bp | 3762513 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269500 |
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| Product | molecular chaperone DnaK |
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| Protein accession | YP_001534905 |
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| Protein GI | 159046111 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAG TCATTGGTAT CGACCTCGGC ACCACGAACT CGTGCGTTGC CATCATGGAC
GGCTCGCAAC CGCGGGTCAT CGAAAACTCC GAAGGGGCGC GGACCACGCC CTCCATCGTC
GGCTACACGG ACGACGAACG GCTCGTGGGC CAGCCGGCCA AGCGCCAGGC GGTCACCAAC
CCGGAAAACA CCGTCTTTGG CGTCAAGCGC CTGATCGGGC GTCGGTTCGA CGATGCAGAT
CTGGAAAAAG ACAAGAAGAA CCTGCCCTAC GCCGTGGTGA ACGGCGGAAA CGGCGACGCC
TGGGTCAGCG TGAAAGGCGA GAATTTCTCC CCCGCGCAGG TCTCGGCCCT CATCCTCAAG
AAGATGAAGG AAACCGCCGA AAGCTATCTC GGCGAGGATG TCACCCAGGC GGTCATCACC
GTCCCGGCCT ATTTCAACGA CGCCCAGCGC CAAGCGACCA AGGACGCGGG CAAGATCGCC
GGCCTCGACG TGCTGCGCAT CATCAACGAG CCGACCGCGG CGGCGCTCGC CTACGGCCTC
GACAAGTCCG ACACCCAGAC GATCGCGGTC TATGACCTCG GCGGCGGTAC GTTCGACATC
ACGATCCTGG AAATCGACGA CGGCCTGTTC GAAGTGAAAT CCACCAACGG GGACACCTTC
CTCGGCGGGG AAGACTTCGA CATGCGGATC GTCAATTACC TGGCCGACGA GTTCAAGAAA
GAACATGGCG TCGACCTGAC CAAGGACAAG ATGGCCCTGC AGCGCCTGAA GGAAGCCGCC
GAGAAGGCCA AGATCGAGCT GAGCTCCTCG ACCCAGACCG AGATCAACCA GCCGTTCATC
TCGATGGACC CCAATGGCGG CCAGCCTTTG CACATGGTGA TGAAGCTCAC CCGCGCGAAG
CTGGAAAGCC TGGTGGCCGA CCTGATCAAG GCCTCGCTGA AGCCGTGCAA GGACGCTCTG
AAGGATGCCG GGCTCAGCAC CTCGGACATC GACGAGGTGG TTCTGGTCGG CGGCATGACG
CGGATGCCGC GGGTCACCGA GGAAGTGTCG AAGTTCTTCG GCAAGGAGCC GCACAAGGGC
GTGAACCCCG ATGAGGTCGT CGCAATGGGC GCTGCGATCC AGGCCGGTGT TCTGCAAGGC
GACGTCAAGG ACGTGGTTCT GCTGGACGTG ACGCCCCTGT CCCTGGGTAT CGAGACCCTG
GGCGGCGTGT TCACGCGTCT CATTGACCGC AACACGACCA TCCCGACCAA GAAGTCCCAG
GTCTTCTCCA CCGCCGAGGA CAACCAGAAC GCCGTGACGA TCCGCGTGTT CCAGGGCGAG
CGCGAGATGG CGGCCGACAA CAAGATGCTC GGCCAGTTCA ACCTTGAAGA CATCCCGCCC
GCCCCGCGGG GGATGCCGCA GATCGAGGTG ACCTTCGACA TCGACGCCAA CGGCATCGTC
TCCGTGTCGG CCAAGGACAA GGGCACCGGC AAGGAGCAGA AGATCACGAT CCAGGCGTCC
GGCGGTCTGT CCGACGAGGA GATCGATCAG ATGGTGCGCG ACGCCGAGGC CAATGCCGAC
GCCGACAAGC AGCGCAAGGA ACTGGTCGAG ACCAAGAACC AGGCCGAGAG CCTCGTGCAT
TCGACGGAGA AGTCCCTCGA AGAGCATGGC GACAAGGTCG ATCCCTCGAC CGTCGAGGCG
ATCGAACTGG CGGTCTCCGC GCTCAAGGAA ACGCTGGAAG GCGACGATGT GGGCAAGATC
AAGTCCGGCA TCCAAAACGT CACCGACGCG GCCATGAAGC TCGGCGAGGC GATCTACAAG
TCGCAGCAGG AAGCCGCGGG GGAAGAAGCC CCCGAGGCGG ATGGCGACAA GGCACGCGAG
GTCGACGACG ACATCGTGGA CGCCGATTTC GAAGACCTGG ACGACCGGAA GCAGGGCTGA
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| Protein sequence | MGKVIGIDLG TTNSCVAIMD GSQPRVIENS EGARTTPSIV GYTDDERLVG QPAKRQAVTN
PENTVFGVKR LIGRRFDDAD LEKDKKNLPY AVVNGGNGDA WVSVKGENFS PAQVSALILK
KMKETAESYL GEDVTQAVIT VPAYFNDAQR QATKDAGKIA GLDVLRIINE PTAAALAYGL
DKSDTQTIAV YDLGGGTFDI TILEIDDGLF EVKSTNGDTF LGGEDFDMRI VNYLADEFKK
EHGVDLTKDK MALQRLKEAA EKAKIELSSS TQTEINQPFI SMDPNGGQPL HMVMKLTRAK
LESLVADLIK ASLKPCKDAL KDAGLSTSDI DEVVLVGGMT RMPRVTEEVS KFFGKEPHKG
VNPDEVVAMG AAIQAGVLQG DVKDVVLLDV TPLSLGIETL GGVFTRLIDR NTTIPTKKSQ
VFSTAEDNQN AVTIRVFQGE REMAADNKML GQFNLEDIPP APRGMPQIEV TFDIDANGIV
SVSAKDKGTG KEQKITIQAS GGLSDEEIDQ MVRDAEANAD ADKQRKELVE TKNQAESLVH
STEKSLEEHG DKVDPSTVEA IELAVSALKE TLEGDDVGKI KSGIQNVTDA AMKLGEAIYK
SQQEAAGEEA PEADGDKARE VDDDIVDADF EDLDDRKQG
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