| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3567 |
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| Symbol | secA |
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| ID | 5713798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3754364 |
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| End bp | 3757090 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269496 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001534901 |
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| Protein GI | 159046107 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGTC TTGGAACCAT CACCAAAAAG GTCTTCGGCA CGCCGAACGA TCGCAAGGTC
AAATCGGTAC GCCCCCTGGT GGCCAAGATC AACGCGCTGG AGCCTGAATT CCAGGCCCTC
GACGACGCCG GGTTGATCGC GAAAACCGAG GAATTCAAGC AGCGGATCGC GGCGGGCGAG
AGCCTCGACG ATCTGCTGCC GGAGGCGTTC GCCAACGCCC GAGAGGGGGC CCGCCGCGCG
CTGGGCCTGC GGGCCTTCGA CACGCAGCTG ATGGGCGGGA TCTTCCTGCA CCAGGGCAAT
ATTTCCGAGA TGAAGACCGG CGAGGGCAAG ACCCTGGTGG CGACCCTGCC GGCGTATCTC
AATGCGCTGA CGGGCAAGGG CGTGCATATC GTCACGGTCA ACGACTACCT CGCCCGCCGG
GACGCTGAGT GGATGGGCAA GGTCTATGCC CAGTTGGGCA TGACCTGCGG CGTGGTCGTC
CCGTTCCAGC AAGAGGATGA GAAGCACGCG GCCTATGCCG CCGATATCAC CTATGCCACC
AACAACGAGC TTGGCTTCGA CTACCTGCGC GACAACATGA AGTCCGAGCT GAGCCAGATG
TCCCAGCGCG GGCATCATTA CGCCATCGTG GACGAGGTCG ATTCGATCCT GATCGACGAG
GCGCGGACGC CGCTGATCAT CTCTGGTCCG AGCCAGGACA AGAGCGACCT CTATGTCACC
ATCGACAAGG TGATCCCCGA GCTGGTCGAA GAGCATTACA CCATCGACGA GAAGACCCGG
GGCGTCAGCT TCACAGACGA GGGCAACGAG TTCCTCGAGG ACCGGCTGCA TGCACTGGGG
ATCTTGCCGG AGGAGCAGTC GCTCTATGAT CCGGAGAGCA CCACCATCGT GCACCACATC
AACCAGGGCC TGCGCGCGCA CAAGCTGTTC AACAAGGATC AGCAGTATAT CGTGCGCAAT
GGGGAAGTCG TTCTGATCGA CGAGTTCACC GGGCGGATGA CCCCGGGGCG GCGCCTGTCC
GAGGGGCTGC ACCAGGCGCT GGAAGCCAAG GAGGGCGTCG AGATCAAGCC CGAGAACGTC
ACGCTCGCAT CCGTTACCTT CCAGAACTAC TTCCGCCTTT ACGACAAGCT CGGGGGGATG
ACCGGGACCG CGGCAACGGA GGCCGAGGAA TTCGCCGAGA TCTACGGGCT CGGCGTGGTC
GAGGTGCCGA CCAACCGCCC GATCCAGCGG GAGGACGAGC ACGACCAGAT CTATCGCACC
GTGCAGGAAA AGTTCGACGC CATCGTCAAG ACCATCAAGG AGGCCCATGC AAAGGGCCAG
CCCATCCTTG TCGGCACGAC CTCGATCGAA AAGTCCGAGT ACCTGTCGCA GCTTCTGAAG
AAAGAGGACG TGCCGCACAA CGTGCTGAAC GCGCGCCAGC ACGAGCAGGA GGCGCAGATC
GTCGCCGATG CGGGCAAGCT GGGCGCGGTG ACCATCGCCA CCAACATGGC CGGGCGCGGC
ACTGACATCC AGCTCGGCGG CAATGTCGAG ATGCGCGTGC TGCAGGCGCT GGCCGAAACG
CCGGAGGCCA ACCCCGACGA GATCCGCACC CGGATCGAGG CCGAGGTGGC CGAGAACAAG
CGCAAGGTGC TGGAGGCCGG GGGCCTGTTC GTGCTGGCCA CTGAACGGCA CGAGAGCCGC
CGGATCGACA ACCAGCTGCG CGGCCGGTCG GGGCGTCAGG GCGACCCGGG GCGGTCGGCC
TTCTTCCTGT CGCTCGAAGA CGACCTGATG CGGATTTTCG GGTCCGAACG GCTCGACAAG
GTGCTCAGCT CGCTCGGCAT GAAGGAAGGG GAGGCGATCG TGCACCCTTG GGTGAACAAG
TCGCTGGAGA AGGCGCAGGC GAAGGTCGAA GGGCGCAACT TCGACATCCG CAAGCAGCTG
CTGAAATTCG ACGACGTGAT GAACGACCAG CGGAAGACCA TCTTTTCCCA GCGGATGGAG
ATCATGGAAA CCGACGACGT GGCCGAGATC ACCCGCGACA TGCGCCACCA GGTGATCAAC
GACCTGGTGG ACGAGTTCAT TCCGCCGAAA TCCTATGCGG ACCAGTGGAA TGTCGAAGGG
CTCTATGCCG CGATCCTGGA GAAGGTCGGC GCCGATACCG ACGTTATCAA ATGGGCCGAG
GAAGAGGGCG TGGATGACGA GATCATTCGC GAGCGGCTGG AGAAGGCCTC CGACGAGTTC
ATGGCGGCCA AGGCGGCGCA ATTCGGTGTC GAGAACATGC GCCGGATCGA GAAGCAACTC
CTGTTGCAGA CCATCGACCA GAAATGGCGT GAGCATCTGC TGACGCTGGA GCATCTGCGC
TCCGTCGTGG GTTTCCGTGG CTATGCGCAG CGCGACCCGC TGAACGAGTA CAAGACCGAG
GGCTTCCAGC TGTTCGAGAG CATGCTCGAC AGTTTGCGGG TGGATGTGAC CGACAAGCTT
GGCAAGATCC GCCCCCTGAC TGAGGAAGAG CAGCAGGCCA TGATGCGCCA GATCGCGGCC
CAGCAGGCCG CGGCCCAGGC GGCGAACGAG GCTGCGCGCC AGCCGCAACC GGCCATGGCC
GGGGCAGGGG CGGAGGCCGA GGAGGGCACG CCCGCGGAGG GCTTCGTCGA GAGCGATCCG
ACCACATGGG GCAACCCGGG CCGCAACGAC CGCTGTCCTT GCGGGTCCGG AAAGAAGTTC
AAGCATTGCC ACGGGCGCTA CACCTGA
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| Protein sequence | MLGLGTITKK VFGTPNDRKV KSVRPLVAKI NALEPEFQAL DDAGLIAKTE EFKQRIAAGE
SLDDLLPEAF ANAREGARRA LGLRAFDTQL MGGIFLHQGN ISEMKTGEGK TLVATLPAYL
NALTGKGVHI VTVNDYLARR DAEWMGKVYA QLGMTCGVVV PFQQEDEKHA AYAADITYAT
NNELGFDYLR DNMKSELSQM SQRGHHYAIV DEVDSILIDE ARTPLIISGP SQDKSDLYVT
IDKVIPELVE EHYTIDEKTR GVSFTDEGNE FLEDRLHALG ILPEEQSLYD PESTTIVHHI
NQGLRAHKLF NKDQQYIVRN GEVVLIDEFT GRMTPGRRLS EGLHQALEAK EGVEIKPENV
TLASVTFQNY FRLYDKLGGM TGTAATEAEE FAEIYGLGVV EVPTNRPIQR EDEHDQIYRT
VQEKFDAIVK TIKEAHAKGQ PILVGTTSIE KSEYLSQLLK KEDVPHNVLN ARQHEQEAQI
VADAGKLGAV TIATNMAGRG TDIQLGGNVE MRVLQALAET PEANPDEIRT RIEAEVAENK
RKVLEAGGLF VLATERHESR RIDNQLRGRS GRQGDPGRSA FFLSLEDDLM RIFGSERLDK
VLSSLGMKEG EAIVHPWVNK SLEKAQAKVE GRNFDIRKQL LKFDDVMNDQ RKTIFSQRME
IMETDDVAEI TRDMRHQVIN DLVDEFIPPK SYADQWNVEG LYAAILEKVG ADTDVIKWAE
EEGVDDEIIR ERLEKASDEF MAAKAAQFGV ENMRRIEKQL LLQTIDQKWR EHLLTLEHLR
SVVGFRGYAQ RDPLNEYKTE GFQLFESMLD SLRVDVTDKL GKIRPLTEEE QQAMMRQIAA
QQAAAQAANE AARQPQPAMA GAGAEAEEGT PAEGFVESDP TTWGNPGRND RCPCGSGKKF
KHCHGRYT
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