| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3563 |
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| Symbol | infB |
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| ID | 5713794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3748757 |
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| End bp | 3751255 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269492 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001534897 |
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| Protein GI | 159046103 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA CAGACGGCAA GAAAACACTC GGACTCCGTG GCGGGTCTCG GACGGGTCAG
GTGAAGCAGA GCTTCAGCCA CGGCCGGACC AAGAACGTCG TGGTGGAAAC CAAGCGCAAG
CGCGTTCTGG TGCCGAAGCC GGGTGCGTCC GCCTCGGGTG GTCGCGGGTC TGATCCCAAG
AAACCCGGCA ATGCGACCGA TGCCGAGATG GAGCGCCGCC TGCGCGCCCT GCGGGCTGCG
AAAGCCAACG AATCCGAAGA GGCGGAGCGC CGCGCGGCCG AGGAAAAGGC CCGCGAAGAA
GAGCGCGCGC GCCGTCGGGC CGAGATCGAG GCGAAGGAAC GCGAAGAGCA GGAGCGCGAA
GAGCGCGCCC GCCAGAAGGC CGAGGAAGAA GAAGAGGCCC GCAAGAAGGC GGAGGCCGAC
GCGTCCTCCA AGCCCGCCGC GGCGCGCAGC AAGGCCGACG ATCCCGCGAC CATGGATCCC
GCAGCCGCCC AGGCCGCCGA GGCCCGTGGT GCCGGCAAGA CCGGATCCGG ACCGCGAAAG
GAGCGCACCG CCGACCGCGC CCAGCCCCGC AAGGAACAGA AGGGCAAGGG CGACGATCGC
CGCCGGTCCG GCAAGCTGAC CCTGAACCAG GCGCTTTCGG GCGATGGCGG GCGTCAGAAG
TCCATGGCTG CGATGAAGCG CAAGCAGGAA CGCGAACGCC GCAAGGCGAT GGGCGGCAGC
CAGGAGCGCG AGAAGATCGT CCGCGACGTG CAGTTGCCGG AAACCATCGT GGTGCAGGAA
CTTGCCAACC GGATGGCCGA ACGTGTGGCC GACGTGGTCA AGGCGCTGAT GAAGATGGGC
ATGATGGTCA CGCAGAACCA GTCCATCGAC GCCGACACCG CCGAGTTGAT CATCGAGGAA
TTCGGCCACA AGGTCGTCCG GGTTTCGGAC GCCGATGTGG AAGACGTGAT CGCGACGGTC
GAGGACGACC CGGCCGACAT GCAGCCGCGT CCGCCGGTCA TCACCGTGAT GGGCCATGTC
GACCACGGCA AGACCTCGCT TCTGGATGCG ATCCGCAACG CCAAGGTCGT GGCGGGCGAA
GCCGGTGGGA TCACCCAGCA TATCGGGGCC TATCAGGTCA CGACCGATGA CGGCACCAAG
CTGAGCTTCC TCGACACGCC GGGCCACGCG GCCTTCACGT CGATGCGGGC GCGCGGCGCG
CAGGTCACCG ATATCGTTGT TCTGGTGGTG GCGGCCGATG ATGCCGTGAT GCCCCAGACC
ATCGAGGCGA TCAATCACGC CAAGGCCGCG AAGGTCCCTA TGATCGTGGC GATCAACAAG
ATCGACCGTC CGGAGGCCAA CCCGGACAAG GTGCGGACCG ACCTGCTGCA ACACGAGGTG
ATCGTGGAGA AGCTGTCGGG CGACGTGCAG GATGTCGAGG TTTCGGCGAT CAATGGCACG
GGTCTCGACC AGTTGCTGGA ATCGATCGCG CTGCAGGCGG AGATTCTGGA ACTCAAGGCG
AACCCGGACC GGGCTGCCGA GGGTGCCGTG ATCGAAGCGC AGCTCGACGT GGGCCGCGGT
CCGGTCGCGA CCGTGCTCGT TCAGAAGGGT ACCCTGCGCC GCGGTGACAT CTTCGTTGTG
GGCGAGCAGT GGGGCAAGGT CCGCGCGCTG ATCAACGATC AGGGCGAGCG GGTCGACGAA
GCCGGACCGT CGGTGCCGGT CGAGGTGCTG GGTCTGAACG GCACGCCCGA GGCGGGCGAC
GTTCTGAACG TGGTCGAAAC CGAGGCCCAG GCCCGGGAGA TCGCCGAGTA CCGCGAGAGC
GCCGCAAAAG AGAAGCGCGC CGCGGCCGGG GCGGCCACGA CGCTCGAACA GCTCATGGCG
AAGGCCAAGT CCGACGAGAC TGTCGCCGAA CTGCCGATCG TTGTGAAAGC CGACGTGCAG
GGCTCTGCCG AGGCCATCGT CCAGACGATG GAGAAGATCG GCAATGAAGA GGTGCGGGTG
CGGGTGCTCC ATTCCGGGGT CGGGGCGATC ACCGAGAGCG ATATCGGCTT GGCCGAAGCC
TCCGGCGCGC CGGTTTTCGG GTTCAACGTC CGGGCGAATG CGCCTGCGCG GAACGCTGCC
CAGCAGAAGG GCGTGGAGAT CCGGTACTAC TCGATCATCT ACGACCTGGT GGATGACGTG
AAGGCAGCGG CCAGCGGTCT TCTGTCTGCG GAGGTGCGCG AGAACTTCAT CGGCTATGCC
GAGATCCGGG AGGTCTTCAA GGTCTCGGGC GTCGGCAAGG TCGCGGGCTG TCTCGTCACC
GACGGTATTG CGCGCCGCTC TGCCGGGGTG CGTCTGCTGC GGGACAACGT GGTGATCCAC
GAAGGCACGC TGAAGACGCT GAAGCGCTTC AAGGACGAGG TCAAGGAAGT GCAATCCGGC
CAGGAATGCG GCATGGCGTT CGAGAACTAC GACGACATTC GCCCCGGCGA TGTCATCGAG
ATCTTCGAGC GCGAAGAGGT CGAACGCAAC CTGGAGTGA
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| Protein sequence | MSDTDGKKTL GLRGGSRTGQ VKQSFSHGRT KNVVVETKRK RVLVPKPGAS ASGGRGSDPK
KPGNATDAEM ERRLRALRAA KANESEEAER RAAEEKAREE ERARRRAEIE AKEREEQERE
ERARQKAEEE EEARKKAEAD ASSKPAAARS KADDPATMDP AAAQAAEARG AGKTGSGPRK
ERTADRAQPR KEQKGKGDDR RRSGKLTLNQ ALSGDGGRQK SMAAMKRKQE RERRKAMGGS
QEREKIVRDV QLPETIVVQE LANRMAERVA DVVKALMKMG MMVTQNQSID ADTAELIIEE
FGHKVVRVSD ADVEDVIATV EDDPADMQPR PPVITVMGHV DHGKTSLLDA IRNAKVVAGE
AGGITQHIGA YQVTTDDGTK LSFLDTPGHA AFTSMRARGA QVTDIVVLVV AADDAVMPQT
IEAINHAKAA KVPMIVAINK IDRPEANPDK VRTDLLQHEV IVEKLSGDVQ DVEVSAINGT
GLDQLLESIA LQAEILELKA NPDRAAEGAV IEAQLDVGRG PVATVLVQKG TLRRGDIFVV
GEQWGKVRAL INDQGERVDE AGPSVPVEVL GLNGTPEAGD VLNVVETEAQ AREIAEYRES
AAKEKRAAAG AATTLEQLMA KAKSDETVAE LPIVVKADVQ GSAEAIVQTM EKIGNEEVRV
RVLHSGVGAI TESDIGLAEA SGAPVFGFNV RANAPARNAA QQKGVEIRYY SIIYDLVDDV
KAAASGLLSA EVRENFIGYA EIREVFKVSG VGKVAGCLVT DGIARRSAGV RLLRDNVVIH
EGTLKTLKRF KDEVKEVQSG QECGMAFENY DDIRPGDVIE IFEREEVERN LE
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