Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3553 |
Symbol | acs |
ID | 5713784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3736896 |
End bp | 3738872 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641269482 |
Product | acetyl-coenzyme A synthetase |
Protein accession | YP_001534887 |
Protein GI | 159046093 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC AGAAACCCAT CGCATCGGGC GAGATCATCA AAGCGGTATC GGAAGAGTTC GCCGCGAACG CCCATATCGA TTCATCGAAG TATTCTGAGA TGTATGCGGC GTCGGTTTCG GATCCTGAGG GGTTTTGGGG GGAGCATGGG CGGTCTTTGG ACTGGATCAA GCCCTACACG AAGGTGAAGG ACACCTCGTT CGCCCATGAC GACGTGCATG TGCGCTGGTT CGAGGATGGC ACGCTGAACG TGGCGGCCAA TTGCATCGAC CGGCATCTGG CGACCCGGGG CGATCAGACC GCGATCATTT TCGAGCCGGA CGATCCCGCC GAGCCTGCCC AGCACATCAC CTATCGCGAG TTGCACCGGC AGGTCTGCAA GCTGTCCAAC GTGCTGGAGG ATCTCGGCGT GCGCAAGGGC GACCGGGTGA TCCTTTACAT GCCGATGATC CCCGAGGCGG CCTATGCGAT GCTGGCCTGT GCCCGGATCG GCGCGATCCA TTCCATTGTT TTCGCGGGCT TTTCGCCCGA TGCCCTCTCG GCGCGGATCA ACGGGGCCGA TGCCAGGCTG CTGATCACCG CGGACTATGC CCCCCGGGGC GGGCGCCAGA CGCCGCTGAA ATCCAACGCC GACGCGGCGC TCTTGCACAC CCGCGACGAC GTCAAGATGC TGGTGGTCAA GCGCACCGGC GGGCAGACCA CCTGGGTGGA CGGGCGCGAT TTCGACTATC ACGAGCTGAT GCTGGAGGCC GACGAGGTCC AGCACCCGGT CGAGGTGGAG GCCGAGCATC CGCTCTTCAT CCTCTATACC TCGGGCTCCA CGGGCCAGCC CAAGGGGGTG GTGCATTCCT CGGGGGGCTA CCTGCTCTAT GCGGCGATGA CCCAGAAATA CGTCTTCGAC GTGCATGAGG GCGATGTCTA CTGGTGCACG GCGGATGTGG GCTGGGTGAC GGGGCACAGC TATATCGTCT ACGGGCCGCT GGCCAATGGC GGCACCACGG TGATGTTCGA GGGCGTGCCG ACCTACCCCG ATGCCTCCCG CTTCTGGCAG GTCTGCGACA AGCACAAGGT CACCCAGTTC TACACCGCCC CCACCGCGAT CCGGGCGCTG ATGGCCAAGG GGCCGGAATT CGTCGAGACA TGCGACCTGA GCAGCCTGCG CGTCCTCGGC ACCGTGGGCG AGCCGATCAA CCCCGAGGCC TGGAACTGGT ACAACGACCT GGTCGGCAAG GGCCGCTGCC CGATCGTCGA CACCTGGTGG CAGACCGAGA CCGGCGGGCA CCTGCTGACG CCGCTGCCCG GCGCGATCGC GACCAAGCCG GGCTCGGCGA CCCTGCCGTT CTTCGGGGTG CAGCCGGTGG TGCTCGACCC CCATTCGGGC GCCGAGATCA CCGAGACCGA ATGCGAGGGG GTGCTGTGCC TCAAGGACAG CTGGCCGGGC CAGATGCGCA CGGTCTACGG CGACCACGAG CGGTTCGTGA AGACCTATTT CTCGGACTAC AAGGGGTATT ACTTCTCGGG CGATGGCTGC CGCCGGGACG CGGACGGGTA TTACTGGATC ACCGGGCGGG TCGATGACGT GATCAACGTG TCGGGCCACC GGATGGGCAC AGCCGAGGTG GAATCGGCGC TGGTGGCCCA TGCCAAGGTC GCCGAGGCCG CGGTCGTGGG CTATCCGCAC GACATCAAGG GCCAGGGCAT CTATTGCTAC GTCACCCTGA TGAATGGCGA GGAGCCCTCC GAGGAGCTGC GCAAGGAGCT GCGCACCTGG GTGCGCACCG AGATCGGCCC GATCGCCGCC CCGGACCTGA TCCAGTGGGC CCCCGGCCTG CCGAAAACCC GGTCGGGCAA GATCATGCGC CGCATTCTGC GCAAGATCGC CGAAGACGAC TTCGGCGCCT TGGGCGACAC CTCAACCCTC GCAGACCCCT CCGTCGTCGA AGACCTCATC GAAAACAGAA TGAACAAGAA AGGATGA
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Protein sequence | MTEQKPIASG EIIKAVSEEF AANAHIDSSK YSEMYAASVS DPEGFWGEHG RSLDWIKPYT KVKDTSFAHD DVHVRWFEDG TLNVAANCID RHLATRGDQT AIIFEPDDPA EPAQHITYRE LHRQVCKLSN VLEDLGVRKG DRVILYMPMI PEAAYAMLAC ARIGAIHSIV FAGFSPDALS ARINGADARL LITADYAPRG GRQTPLKSNA DAALLHTRDD VKMLVVKRTG GQTTWVDGRD FDYHELMLEA DEVQHPVEVE AEHPLFILYT SGSTGQPKGV VHSSGGYLLY AAMTQKYVFD VHEGDVYWCT ADVGWVTGHS YIVYGPLANG GTTVMFEGVP TYPDASRFWQ VCDKHKVTQF YTAPTAIRAL MAKGPEFVET CDLSSLRVLG TVGEPINPEA WNWYNDLVGK GRCPIVDTWW QTETGGHLLT PLPGAIATKP GSATLPFFGV QPVVLDPHSG AEITETECEG VLCLKDSWPG QMRTVYGDHE RFVKTYFSDY KGYYFSGDGC RRDADGYYWI TGRVDDVINV SGHRMGTAEV ESALVAHAKV AEAAVVGYPH DIKGQGIYCY VTLMNGEEPS EELRKELRTW VRTEIGPIAA PDLIQWAPGL PKTRSGKIMR RILRKIAEDD FGALGDTSTL ADPSVVEDLI ENRMNKKG
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