| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3528 |
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| Symbol | bchP |
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| ID | 5713759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3707550 |
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| End bp | 3708734 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269457 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001534862 |
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| Protein GI | 159046068 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.673829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATG ATGTTGTTGT GGTCGGAGGC GGCCCGTCCG GTGCCACCGC TGCCGAGGAC
CTGGCCCGCG CGGGCAAGAA GGTCGCCCTG ATCGACCGCG CCGGGCGGAT CAAACCCTGC
GGCGGCGCGA TCCCGCCCCG ACTGATCGCG GATTTCGACA TCCCCGAGAG CCAGATCGTC
GCCAAGATCA ACACCGCCCG CATGGTCTCG CCCACGGCGC GGCACGTGGA CATCCCCATC
GAGAACGGCT TTGTCGGCAT GGTCGACCGG GAGTTCTTCG ACGAGTTCCT GCGCGACCGC
GCCGCCAAGG CGGGCGCGGA CCGGCACACC GGCACCTTCC TGCGGATCGA CCGGTCGGAA
AAGGGCACCT GGGTCGTCTA TCGCGACAAG ACCAGCCGCG AAGAGGTCGC GATCCGCACC
AAGCTGATCA TCGGCGCGGA TGGCGCGCGG TCGGACGTGG CCCGGGCCGA AGTGCCCGGC
GGCAGCACCA TCCCCTATGT CATCGCCTAT CACGAGATCA TCAAGGCGCC CGAGGGCGTG
TCCGACAAAT ACGATCCGAC CCGCTGCGAC GTGATCTATG ACGGCGTGGT CTCGCCGGAT
TTCTACGGCT GGGTTTTCCC GCACGGCAAA TCCGCCAGTG TGGGCATGGG CACGGGCGTG
GACGGCACCG ACCTGAAGGC GGCAACCAAG CTCCTGCGCG ACAGCGCGGG CCTGAGCGAA
TGCGAGACAA TCCGCAAGGA GGGCGCGCCG ATCCCCCTGA AACCGCTGGA CAAATGGGAC
AATGGCCGGG ACCTGGTTCT GGCCGGGGAC GCCGCGGGCG TGGTCGCACC CTCCTCCGGG
GAAGGGATCT ATTACGCCAT GGCCGGGGGT CGGGTCGCGG GCGAAGCCGC GCTCGAATGC
CTGCGCACCG GGCAGGTCAA GGCGCTGGCC AAGGCCCGCA AACGCTTCCT CAAGGAGCAT
GGGACAGTTT TTCGCGTTCT GGGCGCGATG CAGGACGCCT ATTATCGGTC GGATGAGCGA
CGGGAGCGGT TCGTGTCGCT CTGCCATGAC GTCGATGTGC AGCGACTGAC CTTCGAGGCC
TACATGAACA AGAAACTGGT GCGGGCGCGC CCGATGGCGC ACCTGAAGAT CGGGGTGAAG
AACCTCGCCC ATCTCAGCGG GCTGATCTCG CCGGTGCGGG TATGA
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| Protein sequence | MTYDVVVVGG GPSGATAAED LARAGKKVAL IDRAGRIKPC GGAIPPRLIA DFDIPESQIV
AKINTARMVS PTARHVDIPI ENGFVGMVDR EFFDEFLRDR AAKAGADRHT GTFLRIDRSE
KGTWVVYRDK TSREEVAIRT KLIIGADGAR SDVARAEVPG GSTIPYVIAY HEIIKAPEGV
SDKYDPTRCD VIYDGVVSPD FYGWVFPHGK SASVGMGTGV DGTDLKAATK LLRDSAGLSE
CETIRKEGAP IPLKPLDKWD NGRDLVLAGD AAGVVAPSSG EGIYYAMAGG RVAGEAALEC
LRTGQVKALA KARKRFLKEH GTVFRVLGAM QDAYYRSDER RERFVSLCHD VDVQRLTFEA
YMNKKLVRAR PMAHLKIGVK NLAHLSGLIS PVRV
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