| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3523 |
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| Symbol | pufL |
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| ID | 5713754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3701883 |
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| End bp | 3702722 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641269452 |
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| Product | photosynthetic reaction center subunit L |
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| Protein accession | YP_001534857 |
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| Protein GI | 159046063 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01157] photosynthetic reaction center L subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.382012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.348787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGC TCAGCTTCGA GAGAAAGTAT CGCGTCCGTG GAGGGACGCT GATCGGCGGC
GATCTGTTCG ACTTCTGGGT GGGCCCTTTC TACGTGGGCT TCTTCGGGGT TACGACCGCC
TTCTTTGCCT TGTTAGGCAC CATATTGATC TTCTGGGGCG CATCCCAGCA GGGGACATTC
AATCCCTGGC TCATCAACAT CGCGCCCCCG GACCTGAGCT ACGGGCTCGG GATGGCACCG
CTCATGGAGG GCGGGCTTTG GCAGATCATC ACCATTTGCG CCATCGGCGC CTTCGTCAGC
TGGGCGCTGC GCGAGGTCGA GATCTGCCGC AAGCTGGGCA TGGGGTACCA TGTGCCCTTC
GCTTTCAGCG TGGCGATCTT CGCCTATGTG ACGCTGGTGG TCTTCCGGCC GCTGCTGATG
GGCGCCTGGG GGCACGGATT CCCCTACGGG ATCTGGAGCC ACCTCGACTG GGTGTCCAAC
ACCGGATACG CCTACCTGCA CTTCCACTAC AACCCGGCCC ACATGATCGC GGTGACGTTC
TTCTTCACCA CGACCCTGGC GCTGGCTCTC CACGGGGCGC TGGTTCTGTC CGCCGCAAAC
CCGCCCAAGG GAGAGGAAGT GAAGGGTCCG GACAACGAAG ACACCTTCTT CCGGGATTTC
ATCGGCTACT CGATCGGTAC CCTGGGCATC CACCGCGTGG GTCTGCTCCT GGCGCTGAAC
GCCGGCTTCT GGTCCGCCGT CTGCATCATC ATCTCCGGTC CGGTCTGGAC CAAGGGATGG
CCCGAATGGT GGAACTGGTG GCTCGAAATG CCGATCTGGC CAAGCCAAGT GGGATTGTAA
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| Protein sequence | MALLSFERKY RVRGGTLIGG DLFDFWVGPF YVGFFGVTTA FFALLGTILI FWGASQQGTF
NPWLINIAPP DLSYGLGMAP LMEGGLWQII TICAIGAFVS WALREVEICR KLGMGYHVPF
AFSVAIFAYV TLVVFRPLLM GAWGHGFPYG IWSHLDWVSN TGYAYLHFHY NPAHMIAVTF
FFTTTLALAL HGALVLSAAN PPKGEEVKGP DNEDTFFRDF IGYSIGTLGI HRVGLLLALN
AGFWSAVCII ISGPVWTKGW PEWWNWWLEM PIWPSQVGL
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