| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3500 |
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| Symbol | comF |
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| ID | 5713731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3680913 |
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| End bp | 3681689 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269429 |
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| Product | competence protein F |
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| Protein accession | YP_001534834 |
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| Protein GI | 159046040 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTTCACG GGCAATTGCA AACCGCCTTG CGGACGGTCT ATCCGCCAAG TTGCATCACG
TGCCGCGCGC CGGTGGCCAG CGATTTCGGC CTTTGCGGCG AATGCCTGCG CCAGACACCC
TTCATCGCCG GGGGGATTTG CAATACCTGC GGGGTGCCCG TTGCGGGGCT GTCCGAGACC
GAAACCGACA TCTGCGAAGA CTGTCTGAAC ATTCCGCGCC CCTGGTCCCG GGGCCGCGCA
GTGATGACCT ACCAGGATAT GGGCCGCACG CTCGTGCTGC AGCTCAAGCA TAGCGACCGC
ACCGATCTCG CACGGCCCGC CGGGGCCTGG CTGGCCAGGG CGGCGCGGCC GCTCGTTCAG
GGCAACACGC TGGTGCTGCC GGTGCCGATG CATCGCACGC GACTTCTGCG GCGCACCTAT
AACCAGGCGG TGCTGCTGGC GCGGGTCGCG GCCCGGCATC TCGAACGGCA GATGGTGCCA
GACCTTCTGA CCCGGACCCG GCGCACGCCG ATGCAGGACC AGCGCAGCTT CGAGGAACGC
TTTGCCAATC TCGACGGTGC GGTGTCGGTC TGCGGCGCCC GCGCGCGCAG TGCCGGGATC
GCCGGGCGGC ACGTGCTGCT GATCGACGAC GTGATGACAA GTGGCGCGAC CCTGGCGGCC
TGTGCAGCCG CCTGTCTCGA GGCCGGCGCG GAGGAGGTGG ACATCGCCGT TCTGGCCCGC
GTCCACCGCG AGGAATTCGT CGGTCGCCCG CGCGCCTCCC CGGATGCTGC GCCCTGA
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| Protein sequence | MFHGQLQTAL RTVYPPSCIT CRAPVASDFG LCGECLRQTP FIAGGICNTC GVPVAGLSET
ETDICEDCLN IPRPWSRGRA VMTYQDMGRT LVLQLKHSDR TDLARPAGAW LARAARPLVQ
GNTLVLPVPM HRTRLLRRTY NQAVLLARVA ARHLERQMVP DLLTRTRRTP MQDQRSFEER
FANLDGAVSV CGARARSAGI AGRHVLLIDD VMTSGATLAA CAAACLEAGA EEVDIAVLAR
VHREEFVGRP RASPDAAP
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