Gene Dshi_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3499 
Symbol 
ID5713730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3680013 
End bp3680882 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID641269428 
ProductSAM-dependent methyltransferase 
Protein accessionYP_001534833 
Protein GI159046039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAC CGCCCCGACT TGCAGATCGT GCCGCCCTGG AGGCGCACCG TGCCCGGGCC 
CGCAAGGGGG CGGGGCCCGA GTCGTTTCTG CATGTCGAAG CTCTTCATGA GGTTCAGGAA
AGACTGGACG AGGTTAACAG GAGCTTTACC AAGCCCGCGA TCGTGACCGG TTTTCCCGAA
TTCTGGGCAG ATGCCGTACC GGAAGCCGTG GTCGTGCCCG ACACGGAAGT TCTGGACCTG
CGCGAAGGCG CCCATGACTT GGTGATCCAC GCCATGGCGC TGCATTGGGC CGACGATCCG
GTCGGCCAGC TGGTGCAGGC GCGCCGGGCG CTGAAACCTG ACGGGCTGTT CCTGGCCGTG
GCCTTTGCGG GCGAGACATT GCGCGAGCTG CGCGTGGCCC TGGCCGAAGC CGAGACCCGA
CAACGCGGCG GGCTCAGCCC GCGGGTGGCG CCGATGGGCG ACCTGAGGGA CATGGGCGGG
CTTTTGCAGC GGGCGGGCTT TGCCCTGCCG GTGGCCGACC TGTCCCCGCG CGCGGTGGAA
TATGCCACGC CGCTGCACCT GATGCGGGAG CTGCGCGCCA TGGGCGAGAC CAATGCCCTG
GCCCAGCGCG AGCGCCGGTT TCTGCGCCGC GACGTGCTGG CCCGGGCGGT GGAAATCTAT
GCCCGTGAAT TTCCGGGGGA CAATGGGCGC GTGCGCGCTA CGTTCCAGTT TGCTTTTTTG
ACCGGATGGG CGCCTGCGGC GTCGCAACCG CAACCGCTAA AACCGGGCTC CGCGTCCCAC
AGGCTTGCCG AAGCCCTTGG ATCCGTGGAA TTCGACCGAG ATATGAACCC AGTGACCGAC
CCGACCCCAC GCAGGGACGG CGATGGCTGA
 
Protein sequence
MSVPPRLADR AALEAHRARA RKGAGPESFL HVEALHEVQE RLDEVNRSFT KPAIVTGFPE 
FWADAVPEAV VVPDTEVLDL REGAHDLVIH AMALHWADDP VGQLVQARRA LKPDGLFLAV
AFAGETLREL RVALAEAETR QRGGLSPRVA PMGDLRDMGG LLQRAGFALP VADLSPRAVE
YATPLHLMRE LRAMGETNAL AQRERRFLRR DVLARAVEIY AREFPGDNGR VRATFQFAFL
TGWAPAASQP QPLKPGSASH RLAEALGSVE FDRDMNPVTD PTPRRDGDG