| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3480 |
|---|
| Symbol | modE |
|---|
| ID | 5713711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3662578 |
|---|
| End bp | 3662931 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641269409 |
|---|
| Product | transcriptional regulator ModE |
|---|
| Protein accession | YP_001534814 |
|---|
| Protein GI | 159046020 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2005] N-terminal domain of molybdenum-binding protein |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCCC GCCTGCGCTT GCGGCTGCAA TTCGAAGAAG GCGCCCGGCT CGGTCCGGGC
AAGGCCGATC TGCTGGAGCA TATCGGGGCC ACCGGGTCCA TCTCCGCCGC GGGCCGCGCC
ATGAAGATGA GCTATACCCG CGCCTGGGCC TTGGTCGAGC AGATGAATGA CACTTTTGCC
GAACCCCTTG TCAGCAGTGC CCGCGGGGGC GCCAAGGGCG GGGGGGCGCA GCTGACCGAG
GCGGGGACCG CCGTGCTGAC CCATTACCGG CAACTCGAAG CCGCCGCCGC GACGGCCGGC
GCGCCGCAGA TCGCCGCGAT CGAGGCGCTG CGCAAGGGGG CCCACGATGA CTAG
|
|---|
| Protein sequence | MSPRLRLRLQ FEEGARLGPG KADLLEHIGA TGSISAAGRA MKMSYTRAWA LVEQMNDTFA
EPLVSSARGG AKGGGAQLTE AGTAVLTHYR QLEAAAATAG APQIAAIEAL RKGAHDD
|
|---|
| |