| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3478 |
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| Symbol | pcaC |
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| ID | 5713709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3660856 |
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| End bp | 3661242 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269407 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | YP_001534812 |
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| Protein GI | 159046018 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACA AGTCACGCTA CGAGATCGGG ATGGAAGTGC GGCGCGCAGT GCTGGGTGAT
GCCCATGTGG ACCGGGCCGA AGCGGCGAAG AATCCGTTGG ATGCGCCGTT CCAGTCGCTG
ATCACCGAGG CCGCCTGGGG CACCGTCTGG GCCTCCGACG CGATCAGCCG GCGCGAACGC
TCCATGCTGA CGCTTGCGCT GCTGGCCGCC ACCGGGAATT TCGACGAGAT TCCGATGCAT
GTCCGGGCCT GCGTCAATAC CGGGGCCAGC AAGACCGACG TGATGGAGGT GTTCCAACAC
GTGGCGATCT ATGCCGGGGT GCCGCGGGCC AATCACGCGA TCAAACTTGC CAAGGCCACC
TTTGCCGAGA TGGAGGCAAG GTCATGA
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| Protein sequence | MSDKSRYEIG MEVRRAVLGD AHVDRAEAAK NPLDAPFQSL ITEAAWGTVW ASDAISRRER
SMLTLALLAA TGNFDEIPMH VRACVNTGAS KTDVMEVFQH VAIYAGVPRA NHAIKLAKAT
FAEMEARS
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