Gene Dshi_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3472 
SymbolargG 
ID5712530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3655044 
End bp3656264 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content63% 
IMG OID641269401 
Productargininosuccinate synthase 
Protein accessionYP_001534806 
Protein GI159046012 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGC CCAAGAAAGT CGTTCTCGCC TATTCCGGTG GTCTGGATAC GTCGATCATC 
CTCAAGTGGC TGCAGACGGA ATATGACTGC GAGGTGGTGA CCTTCACCGC CGATCTGGGC
CAGGGCGAAG AGCTCGAGCC CGCACGCGCC AAGGCCGAAA TGATGGGCGC ATCGGCGATC
TATATCGAAG ACCTGCGCGA GGAGTTCGTG CGCGATTTTG TCTTTCCGAT GTTCCGGGCG
AACGCAGTCT ACGAGGGGCT TTACCTTCTG GGCACGTCCA TCGCGCGGCC GCTGATCTCA
AAGCGGCTGG TGGAGATTGC CGAGGCGGAA GGTGCCGATG CCGTGGCCCA TGGCGCGACC
GGCAAGGGCA ACGACCAGGT CCGGTTCGAG CTGGCCGCCT ATGCCCTGAA CCCCGACATC
AAGGTGATCG CGCCCTGGCG GGAATGGGAC CTGTCGAGCC GCACCAAGCT GATCGACTTC
GCCGAGAAGC ACCAGATCCC GATCGCGAAA GACAAGCGGG GAGAAGCGCC GTTTTCGGTG
GATGCGAACC TGTTGCACAC CTCTTCAGAG GGCAAGGTTC TGGAGGATCC GGCGGAGGAC
GCGCCCGACT ACGTCTATCA GCGCACGGTG AATCCCGAGG ATGCACCGAA TACGCCGGAA
TACATCGAGG TCGGGTTCGA GCGCGGCGAC GCGGTGTCGA TCAACGGCGA AGCGATGTCC
CCGGCAACGG TTCTGACCAA GCTGAACGAG CTGGGTGGGG CGCACGGGAT CGGGCGTCTC
GACCTTGTAG AGGGTCGGTT TGTCGGCATG AAGTCCCGGG GCATCTATGA GACGCCGGGG
GGCACGATCC TGCTGGAGGC CCATCGCGGG ATCGAGCAGA TCACGCTCGA CCGGGGGGCT
GCGCACCTCA AGGACGAGCT GATGCCGCGC TACGCGGAGC TGATCTATAA CGGCTTCTGG
TTCTCGCCGG AGCGGGAGAT GCTGCAGGCC GCCATCGATG CGAGCCAGGC GCATGTGACC
GGCACCGTGC GGCTGAAGCT CTACAAGGGA TCCGTGCGCA CCGTGGGTCG CTGGTCGGAT
CACAGCCTCT ATTCCGAGGC CCACGTGACC TTCGAGGACG ACGCAGGCGC CTACGACCAG
AAAGACGCGG CGGGTTTCAT CCAGCTCAAC GCCCTGCGCC TGAAACTGCT GGCCGCGCGC
AACAAGCGTC TCGGGAAATA A
 
Protein sequence
MSAPKKVVLA YSGGLDTSII LKWLQTEYDC EVVTFTADLG QGEELEPARA KAEMMGASAI 
YIEDLREEFV RDFVFPMFRA NAVYEGLYLL GTSIARPLIS KRLVEIAEAE GADAVAHGAT
GKGNDQVRFE LAAYALNPDI KVIAPWREWD LSSRTKLIDF AEKHQIPIAK DKRGEAPFSV
DANLLHTSSE GKVLEDPAED APDYVYQRTV NPEDAPNTPE YIEVGFERGD AVSINGEAMS
PATVLTKLNE LGGAHGIGRL DLVEGRFVGM KSRGIYETPG GTILLEAHRG IEQITLDRGA
AHLKDELMPR YAELIYNGFW FSPEREMLQA AIDASQAHVT GTVRLKLYKG SVRTVGRWSD
HSLYSEAHVT FEDDAGAYDQ KDAAGFIQLN ALRLKLLAAR NKRLGK