Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3470 |
Symbol | |
ID | 5712528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3652890 |
End bp | 3653921 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641269399 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001534804 |
Protein GI | 159046010 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCATC CGGAACAGGT CATCCTCGGT ACCGCGGTCA GCGGTGGCAC CTCTCTCCAG GTCGCGGCGC GTCTTCTGGT GCGCGGGGAT ATGGCCAAGT TAATCGCGGT GGAGACCGGT GGAACCATGG CCGAGGCCCG GCTGGACGCG GTGAGGTTCG ATCCGCCGCT GGGGTCGCTG CCACGCAAGC TGCGCTTCCC GGACGGTGCC GAGTTCGAAA CGGGGGACCG CGAGGCGATT GCCGCGTTGG AGCCGCGCGG CTTCTGGACC CGGCTGCACG GATGGGAACG GCTGCATCCG CGCCTGATCC TGTTCGTGGT TGGCGGATTC GCGGGCGGCT GGCTGGTCTA TTCCGTGGCC CTCACCGCAC TGGTTGCCAT GGCTGTCGCC CTGACACCGG AGCCCCTCGT GCGGGCGATG GATCGCAGTA CCCTCTCCGC CCTCGACCGC GTCATTGCCT CCGAAACAGC GCTGAGTACA GCAGATCAAG CCGAGGCTCG CGCGATTTTC GAGGACCTGC GCGCGGTTCT GCCGGACCGC GACCTCGCGG AAGCCGTGAG CCTGGAGTTT CGGGCGCTCC GGGGTTTGGG ACCGAATGCG CTGGCCCTGC CCGGGGGCAC CGTGGTGTTG TCGGATGCCT TGGTTAAGCA GTTCGATGCT GATGTCGTCG CCTCGGTGCT CGGCCATGAG ATCGCCCATG TGATGGAGGA ACACTCCCTC AAGCGGCTCT ATCGGTCGCT GGGCATCTAC GTGATGGTCG CCCTGATCGC CGGGGAAACC GGGCCTTTGC TCGAGGATCT TCTGCTGGAG GGGAATGTGC TGCTGTCGCT GTCCTACTCC CGCGGGCAGG AGGCGGAGGC GGATCAGATC GGCCTGCGGC TCGCCGACGC CGCAGGGTAT GATCCGACCG GGTTGAAGGT ATTTTTTGAA ACGCTCGCGG CCGAGGTCGG AGACGGCGGT GGCTGGCTGT CCACCCATCC GGGCAATGAC GACCGCATCG AGGCAATCGA TGCCTATCTG GAGGCGCGCT AG
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Protein sequence | MAHPEQVILG TAVSGGTSLQ VAARLLVRGD MAKLIAVETG GTMAEARLDA VRFDPPLGSL PRKLRFPDGA EFETGDREAI AALEPRGFWT RLHGWERLHP RLILFVVGGF AGGWLVYSVA LTALVAMAVA LTPEPLVRAM DRSTLSALDR VIASETALST ADQAEARAIF EDLRAVLPDR DLAEAVSLEF RALRGLGPNA LALPGGTVVL SDALVKQFDA DVVASVLGHE IAHVMEEHSL KRLYRSLGIY VMVALIAGET GPLLEDLLLE GNVLLSLSYS RGQEAEADQI GLRLADAAGY DPTGLKVFFE TLAAEVGDGG GWLSTHPGND DRIEAIDAYL EAR
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