| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3453 |
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| Symbol | rho |
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| ID | 5712511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3634311 |
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| End bp | 3635582 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641269382 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001534787 |
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| Protein GI | 159045993 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG AGCGTCTCGC CCTTGCCGAT CTCAAAGCTA TGAGCCCTGC TGATCTTCTG
CCCCTGGCCG AGGAGCTGGA GGTTGAAAAC GCATCCACCA TGCGGAAAGG CGACATGATG
TTCGCCATCC TCAAGGAGCG TGCAGAGGAT GGATGGGAAA TTTCTGGCGA TGGCGTTCTG
GAAGTCATGC AGGACGGGTT CGGGTTTCTC CGCTCCCCCG AGGCGAACTA TCTGCCGGGC
CCGGACGACA TCTATGTTTC TCCCGAGAAA ATTCGGCAGC ACTCCCTGCG CACTGGCGAT
ACCGTCGAAG GGGTGATCCA GGCCCCGCGG GAGAACGAAC GCTATTTCGC GATCACCTCC
GTCAGCCTGG TAAACTTCGA AGACCCGGAG ATGGCACGTC ACAAGGTGAG CTTTGATAAC
TTGACGCCTC TTTATCCGGA CGAGCGGCTG AAGATGGAGA TCGAGGATCC GACGATCAAG
GATCGGTCTG CCCGGATCAT CGACCTGGTG GCACCGATCG GGAAGGGGCA GCGGTCGCTG
ATCGTGGCTC CGCCGCGGAC GGGCAAGACG GTCCTGTTGC AGAATATCGC CAAGAGCATC
GCAGCCAATC ATCCTGAATG CTATCTGATG GTGCTGCTGA TCGATGAACG TCCAGAAGAA
GTCACGGACA TGCAGCGTTC GGTGAAAGGG GAGGTGATTT CCTCCACTTT CGATGAGCCG
GCCTCGCGCC ACGTGGCAGT GTCCGAGATG GTGATCGAGA AGGCCAAGCG CCTGGTGGAG
CACAAGCGGG ACGTGGTTAT CTTGCTGGAT TCGATCACTC GTCTTGGTCG GGCTTTCAAC
ACGGTCGTTC CGTCTTCGGG CAAGGTGCTG ACCGGGGGTG TGGATGCCAA TGCGTTGCAG
CGGCCGAAGC GGTTCTTCGG TGCGGCCCGA AACATCGAAG AAGGCGGGTC GCTGACAATC
ATCGCAACCG CATTGATCGA TACAGGCTCC CGTATGGACG AAGTGATCTT TGAAGAGTTC
AAGGGTACGG GCAACTCCGA GATCGTGCTT GACCGCAAGG TGGCCGACAA GCGGGTCTTC
CCGGCGATGG ACATCCTCAA ATCCGGCACG CGCAAAGAGG ATCTCCTTGT CGATGCCAAG
GATCTTCAGA AGACCTTTGT GCTGCGTCGC ATTCTGAATC CCATGGGGAC CACGGATGCC
ATCGAGTTCC TGATCTCGAA GCTGAAGCAG ACGAAGACCA ATTCCGAGTT CTTCGATTCG
ATGAACACCT GA
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| Protein sequence | MTQERLALAD LKAMSPADLL PLAEELEVEN ASTMRKGDMM FAILKERAED GWEISGDGVL
EVMQDGFGFL RSPEANYLPG PDDIYVSPEK IRQHSLRTGD TVEGVIQAPR ENERYFAITS
VSLVNFEDPE MARHKVSFDN LTPLYPDERL KMEIEDPTIK DRSARIIDLV APIGKGQRSL
IVAPPRTGKT VLLQNIAKSI AANHPECYLM VLLIDERPEE VTDMQRSVKG EVISSTFDEP
ASRHVAVSEM VIEKAKRLVE HKRDVVILLD SITRLGRAFN TVVPSSGKVL TGGVDANALQ
RPKRFFGAAR NIEEGGSLTI IATALIDTGS RMDEVIFEEF KGTGNSEIVL DRKVADKRVF
PAMDILKSGT RKEDLLVDAK DLQKTFVLRR ILNPMGTTDA IEFLISKLKQ TKTNSEFFDS
MNT
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