Gene Dshi_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3444 
SymbolmltA 
ID5712502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3627798 
End bp3628826 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID641269373 
Productmembrane-bound lytic murein transglycosylase A 
Protein accessionYP_001534778 
Protein GI159045984 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC TCCGCGCGGC GGTGCTGGGC GTTGGACTGA TGGCTGGCGC TACGCCCGCA 
CATGCATCTG TTGAACTTCT TGGTTTCGGT GACCTCAAAG GCTGGGCCGA GGATTCTCAT
ACAGAGGCGC TGGAAGCCTT CCGGACAACT TGCGTCGATC TGAAGGATCC AGCTTGGGGT
CCCATCTGCG CAATTGCCCG CGCGACGAAT GATGCGCGCG GGTTCTTCGA GAGCTTGTTC
CTCCCGATCC TGATCAAGGG CGATGACGAG GCGCTCTTCA CCGGCTACTA CGAGCCCGAG
CTGCGCGCAT CGCGCACGCG CGGTGGCGCG TATCAGTACC CGATTTACCA AGTGCCACCC
GAATTGCCCC GCGATCGGCC CTGGTATACC CGAGGCGAGC TGGAAGACCG CGGGATCCTG
AACGGGCGCG GACTTGAGCT GGCTTACGCC ACCGATCCGG TGGAGGTTTT TTTCCTTCAG
GTTCAGGGCT CCGGCCGTCT GCGCTTGACC GACGGGACAG TGATGCGCGT GGGGTTCGCG
GCGAAAAACG GCCATGACTA TAGCTCTGTC GGGCGCGAAA TGGTCCGGCG TGGGCTGTAC
CAGCCGCACC AGGTTTCCGC CGATCGGATC AAGGCCTGGG TGCGGGCCAA TGGCGCCGCC
GGCAAGCGGC TGCTGCACCA CAACAAATCC TTTGTGTTCT TTCGTGAAGT ATCCACCGTA
CCTGCCCATC TGGGGCCTTT GGGGGCGATG AACCGGTCAA TCACGCCGAT GCGGACCATC
GCGGTGGATC CGACCTATAC CCCCCTAGGG GCGCCGGTCT GGATCGAGAA GGGCGGGGCA
GACCCCTTGC GCCGCTTGAT GGTGGCGCAG GATACCGGCT CTGCGATCAA GGGGGCCCAG
CGCGCGGACG TGTTCTACGG CTCAGGCGAG GCGGCGGGTG ACAAGGCCGG GCGTATCCGC
GATCCGGGGC GCATGGTTGT ACTGCTACCG GTGGAGTTGG CGTTGTCCTA CGTGGAAAGT
GGGATGTGA
 
Protein sequence
MIPLRAAVLG VGLMAGATPA HASVELLGFG DLKGWAEDSH TEALEAFRTT CVDLKDPAWG 
PICAIARATN DARGFFESLF LPILIKGDDE ALFTGYYEPE LRASRTRGGA YQYPIYQVPP
ELPRDRPWYT RGELEDRGIL NGRGLELAYA TDPVEVFFLQ VQGSGRLRLT DGTVMRVGFA
AKNGHDYSSV GREMVRRGLY QPHQVSADRI KAWVRANGAA GKRLLHHNKS FVFFREVSTV
PAHLGPLGAM NRSITPMRTI AVDPTYTPLG APVWIEKGGA DPLRRLMVAQ DTGSAIKGAQ
RADVFYGSGE AAGDKAGRIR DPGRMVVLLP VELALSYVES GM