| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3440 |
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| Symbol | hslV |
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| ID | 5712498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3624024 |
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| End bp | 3624581 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269369 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_001534774 |
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| Protein GI | 159045980 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.952306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAGA CATCCTTCCC CGGCTGGCAC GGCACCACCA TCATCGGCGT CAAGAAGAAC
GGCAAGGTTG TGGTCGCTGG CGACGGGCAG GTCAGCCTTG GCCAGACCGT CATCAAGGGA
ACCGCCCGCA AGGTGCGCCG CCTGACCCCG GGTGGACATG ACGTGGTCGC GGGTTTCGCA
GGCTCGACCG CCGATGCCTT CACCCTGCTG GAACGGCTGG AAGCCAAGCT CGAAGCGACC
CCCGGGCAGT TGCAGCGCGC GGCGGTGGAA CTGGCCAAGG ACTGGCGCAC CGACAAGTAC
CTGCAAAAGC TCGAAGCGAT GCTGATCGTG ACGGACGGTT CCCTTCTTCT GGTGATTACA
GGGGCGGGCG ATGTGCTGGA GCCAGAGCAT GACATCGCCG CCATCGGCTC TGGCGGAAAT
TTCGCCCTTG CGGCTGCCCG TGGCCTGATG GAGGCGGATT TCGACGCCGA AACGATTGCC
CGCAAGGCAA TGCAGATCGC AGCAGACATT TGTGTCTACA CCAACGGAAA CCTGACTGTC
GAAGCGATCG ACGCCTGA
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| Protein sequence | MTETSFPGWH GTTIIGVKKN GKVVVAGDGQ VSLGQTVIKG TARKVRRLTP GGHDVVAGFA
GSTADAFTLL ERLEAKLEAT PGQLQRAAVE LAKDWRTDKY LQKLEAMLIV TDGSLLLVIT
GAGDVLEPEH DIAAIGSGGN FALAAARGLM EADFDAETIA RKAMQIAADI CVYTNGNLTV
EAIDA
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