Gene Dshi_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3434 
Symbol 
ID5712492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3615034 
End bp3615531 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID641269363 
Productprotein of unknown function UPF0079 
Protein accessionYP_001534768 
Protein GI159045974 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG AAGCCCTCGC CCGACTGACC CTGACCAGCG AAGACAGTCT GCGCGCCTTC 
GGAGCCTGTC TCGCGCCGGT CTTGCAACCG GGCGATGCAC TTCTGCTTGT CGGGGAGATC
GGCGCCGGCA AAACTGTGCT TAGCCGCGCC ATCATCCAGA CACGCCTTGC CGCTATCGGT
GTTATGGAGG ACGTACCCTC TCCCACGTTC ACGCTTGTGC AGACCTATGC CCTTGGGAAC
GTGGACCTGT GGCATTGTGA CCTCTACCGC CTCACGGACC CCGAAGAGGT CGTAGCGCTC
GGGCTGGAAG AAGCTTTCCG TGATGCAATC ACTCTCATTG AGTGGCCGGA TCGATTGGGC
GACGAGATAC CGCCGAATGC GCTGGTGATC GACCTGCGCA TCCCGGATGC GACCCCGTTG
CAACGCGACA TGACCCTCAC CGCCTTCGGA GCAGAATGGT CACGTCGCAT CAACCCCTGC
CTGGATCTGG CCGCATGA
 
Protein sequence
MEPEALARLT LTSEDSLRAF GACLAPVLQP GDALLLVGEI GAGKTVLSRA IIQTRLAAIG 
VMEDVPSPTF TLVQTYALGN VDLWHCDLYR LTDPEEVVAL GLEEAFRDAI TLIEWPDRLG
DEIPPNALVI DLRIPDATPL QRDMTLTAFG AEWSRRINPC LDLAA