| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3405 |
|---|
| Symbol | dsbA2 |
|---|
| ID | 5712463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 3583162 |
|---|
| End bp | 3583923 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641269334 |
|---|
| Product | thiol:disulfide interchange protein DsbA |
|---|
| Protein accession | YP_001534739 |
|---|
| Protein GI | 159045945 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1651] Protein-disulfide isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGGC CGGCTACATG GTCCGAATTG GAGACAGAGA TGAAGCATTG GGTCTACGTC
GCGGCCATTG GCGCCAGCCT GGCATCCCCG GTTGCCGCGC AGGAGCTGAG CGAAGAACGG
ATCAAGGAGT TGGCGCTGGA AGCCATTCTT GAAAACCCGC AAATCGTCAT GGATGCGGTG
GCGATCCTGC GAGAGCGCGA AGCTGAAGCG CAGGTCGCCA GTGCGGCGGA AACTCTCGCC
AATCAACGCG ATTTGCTGGA GCGCGATGAA AACGCGCCTG TTCTGGGTAA TCCCGATGGC
GACGTGACCG TGATTGAGTT CTTCGACTAC AATTGTCCAT ACTGCCGTCG CGCGAAGCCG
ACGATCGAGG GGCTGATCGC TGCGGACCCG AATGTCCGGG TGGTTTTCCG TGAATTCCCG
ATTCTCGGTG ACGACTCCGT TCTGGCGGCA CGCGCGGCCC TCGCAGCCCG TGCCCAAGGC
ATGTACGAGG AATTTCACTG GGCGCTCATG GCATTGTCGG GGCGCATAAA CGAAGCGCAG
ATCATGCAGA CAGCAGATGA TCTTGGCCTC GATGTCGCCC AGCTTGAGGC GGACATGCAG
TCAGATGCCG TGACAATGCA TATCGAGACG TCACTGAGCC TCGCGCAGTC GCTTGGAATT
TCGGGAACAC CGTCTTTCGT GGTTGGCGAG ACAATCTTGC CCGGGCTCGT CGACCAGGCG
CGGCTCGAAG AGTTGGTGGC GCAGGAGCGC TCCGACGGTT GA
|
|---|
| Protein sequence | MKGPATWSEL ETEMKHWVYV AAIGASLASP VAAQELSEER IKELALEAIL ENPQIVMDAV
AILREREAEA QVASAAETLA NQRDLLERDE NAPVLGNPDG DVTVIEFFDY NCPYCRRAKP
TIEGLIAADP NVRVVFREFP ILGDDSVLAA RAALAARAQG MYEEFHWALM ALSGRINEAQ
IMQTADDLGL DVAQLEADMQ SDAVTMHIET SLSLAQSLGI SGTPSFVVGE TILPGLVDQA
RLEELVAQER SDG
|
|---|
| |