| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3375 |
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| Symbol | recF |
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| ID | 5712433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3547348 |
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| End bp | 3548433 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641269304 |
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| Product | recombination protein F |
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| Protein accession | YP_001534709 |
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| Protein GI | 159045915 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGGG TCGCTGTCAC ATCCCTGTCC CTATCGCATT TTCGATCCCA TACACATCTG
ACCTTGTCTC TGGATGAGAG GCCGGTTGTA CTGCATGGTC CGAACGGGAT CGGTAAGACA
AACGTCCTGG AGGCACTGAG CTTTTTGTCC CCTGGGCGCG GCCTGCGGCG AGCGAAGACA
GAGGCAGTTG GCCAGTCGGA GGCCGGTCTC GGATGGCGGG TCTCGGCTCT TGTGAAATCC
GGCGGTCGCG AAAGGGAGGT TATGACTCGC AGCGATGCGG GCGCCTCCAG AACGGTTCAG
TTGGATGGCA AACCGGTTCC TCAAATGGCG CTCGCGGAAC TCGTTCCAAT GGTCTGGTTG
GTACCTGCCA TGGACAGGTT GTGGATCGAA GCTGCCGAAG GCCGTCGGAA ATTTCTCGAC
CGCATGACCC TGAATTTCGT GACAACTCAT GGGCGCGATG TTCTGGCATA TGAAAGGGCC
ATGCGGGACA GGAACCGGCT CTTGAAGGAT GGAGTGCGAG ATCCTCACTG GTACCATGCG
CTCGAGGCGC AGATGGCCGA AGCGGGCGCG CGCATTACGC AGAACCGGCA AAGATGTCTT
TCCGAAATCG AAGCGGCCCA GGCCGACGCA ACGACCGCGT TCCCATTCGC AGGGTTGCAA
ATCGAGGCGC ATGACGGGCG CGCACCGCTC AGAACCAAAG GCGAGATCGA AAATACGCTT
CGATGTAACC GGTACATGGA CCAGACGGCC GGGCGTACCC TGGACGGTCC CCATCGCGAC
GATCTTGCCG CGGTCTATGT TTCCAAGGGT ACGCCTGCGC GGGACTGCTC GACGGGAGAG
CAGAAAGCCC TTCTGATTTC GCTTATCCTG TCCATGTCGC GGGCCGTAAA AAGCCTTGTT
GGGCAAGCGC CCCTCGTTTT ACTGGACGAG GTCGCCGCGC ACCTGGATCA GGAGCGTCAG
CGTGCGCTTT ATGATGAGAT CTGCGCTCTA GGCGCGCAAG CCTGGATGAC CGGGACGGGC
GCGGAGCTGT TTCAGCCCCT GGGAGAGCGG GCGCAGTTCA TCGCTCTGCC ACTCGACGGG
ACTTAG
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| Protein sequence | MTGVAVTSLS LSHFRSHTHL TLSLDERPVV LHGPNGIGKT NVLEALSFLS PGRGLRRAKT
EAVGQSEAGL GWRVSALVKS GGREREVMTR SDAGASRTVQ LDGKPVPQMA LAELVPMVWL
VPAMDRLWIE AAEGRRKFLD RMTLNFVTTH GRDVLAYERA MRDRNRLLKD GVRDPHWYHA
LEAQMAEAGA RITQNRQRCL SEIEAAQADA TTAFPFAGLQ IEAHDGRAPL RTKGEIENTL
RCNRYMDQTA GRTLDGPHRD DLAAVYVSKG TPARDCSTGE QKALLISLIL SMSRAVKSLV
GQAPLVLLDE VAAHLDQERQ RALYDEICAL GAQAWMTGTG AELFQPLGER AQFIALPLDG
T
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