Gene Dshi_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3370 
Symbol 
ID5712428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3542870 
End bp3543646 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content59% 
IMG OID641269299 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001534704 
Protein GI159045910 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACA ACACGCTGAT CGTCGAAATT GAAGATCACG TCGCCTTGAT CCGTCTGAAC 
CGGCCGGATG CGCTGAATGC TTTGAATACC GAGCTTTTGG GAGAACTCGC CAAGGCGCTG
CGGAGCGCGG AGGAAAATGA AAAAGTCCGC TGCATCATCC TGACAGGCTC GGAGAAGGCC
TTTGCGGCGG GGGCGGATAT CAAGGAGATG TCCGAGAAAA CCTTTGTCGA GGTGTTCAGC
AGCGATCTGT TCGGCCCGGA AGTGGAGCGC CTGCTCAACT GTCGCAAACC GATTATCGCA
GCCGTTTCGG GATATGCGCT GGGCGGTGGC TGCGAGATCG CGATGATGTG CGACTTCATC
ATCGCATCCG AGACCGCTAA GTTTGGACAG CCGGAAATCA ACCTTGGCGT GGTGGCCGGG
ATCGGCGGCA CTCAGCGGCT GACCCGCTTT GTCGGGAAAT CCAAGGCGAT GGACATGCAC
CTGACAGGGC GGTTCATGGA CGCAGAGGAA GCGGAGCGAT CCGGTCTCGT CAGCCGCGTG
GTCCCAACCA AAAAGCTCAT GGAAGAAGCC ATGGGCGCCG CGCAGAAAAT CGCGGAGAAA
TCCGTGCTCA CCTCCATGGC CGTAAAGGAA GCCGTCAACC GATCCTATGA GACGACCCTG
CGCGAAGGGC TTCTGTTCGA GCGCCGGCTC TTTCATGCGA TGTTCGCCAC GGAAGACCAA
ACCGAAGGGA TGGGCGCCTT CCTTGAGAAG CGCGAACCGC AGTTCCGCGA CAAGTAA
 
Protein sequence
MAYNTLIVEI EDHVALIRLN RPDALNALNT ELLGELAKAL RSAEENEKVR CIILTGSEKA 
FAAGADIKEM SEKTFVEVFS SDLFGPEVER LLNCRKPIIA AVSGYALGGG CEIAMMCDFI
IASETAKFGQ PEINLGVVAG IGGTQRLTRF VGKSKAMDMH LTGRFMDAEE AERSGLVSRV
VPTKKLMEEA MGAAQKIAEK SVLTSMAVKE AVNRSYETTL REGLLFERRL FHAMFATEDQ
TEGMGAFLEK REPQFRDK