Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3369 |
Symbol | mutM |
ID | 5712427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3541951 |
End bp | 3542805 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641269298 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_001534703 |
Protein GI | 159045909 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAC TTCCAGAGGT CGAAACCGTG CGCCGCGGGC TGGAACCCGT GATGACCGGG CAGCGGATCA TCGAAGCCGA TATTCGCCGC CCGGACTTGC GTTGGCCTCT CCCCGCGAAC ATGCAGACAC GTCTCGAAGG CAAGCGGATT CTGCGGCTGG CGCGACGATC GAAGTATATT CTGGCCGAGC TCGACAGTGG CGAGACCCTC ATCATCCATC TTGGCATGTC GGGGCGGATC CTGATCCATG GCGGGCAGGC TCCGGGAGCA TTTCATCACG CTTTGCCCTC GCTGGAAAAA CACGATCACG TAGTGCTGGA TTTCGACACG GGCGCACGGG TGGTCTTCAA CGACGCGCGC CGCTTCGGAG CCATGGACTT GTGCGAAACC ACCGAGATCG ACCAACACCC GATGCTGGCA ACACTTGGCC CCGAGCCCTT GGGAAACGCG TTCCACGAAG CCTACCTGAC CACGCGACTG AAGGGTCGGA TGACACCGAT CAAGTCCGCG CTTCTCGACC AGAAGGTCGT CGCAGGCCTC GGCAACATCT ATGTGTGCGA AGCGTTGTTC CAAGCCGGTA TCTCGCCCCT GAGAAAGGCG GGACGGGTTT CGGAAACCCG CATCGCATCT CTCGTGCCGA TCATCCGCAC GGTTCTGGGC GACGCGATCG AGGCAGGGGG ATCCTCTTTA CGCGATTACC GGCAAACGGA CGGTGATCTG GGCTATTTTC AGCACCGGTT CCGGGTTTAC GACCGTGAAA ACGCCCCCTG CGTCACGGCG GGTTGCCCAG ATGTTGTGCG CCGCGTGGTG CAGTCTGGCA GATCGTCGTT CTACTGTCCG AGCTGCCAAA GATAG
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Protein sequence | MPELPEVETV RRGLEPVMTG QRIIEADIRR PDLRWPLPAN MQTRLEGKRI LRLARRSKYI LAELDSGETL IIHLGMSGRI LIHGGQAPGA FHHALPSLEK HDHVVLDFDT GARVVFNDAR RFGAMDLCET TEIDQHPMLA TLGPEPLGNA FHEAYLTTRL KGRMTPIKSA LLDQKVVAGL GNIYVCEALF QAGISPLRKA GRVSETRIAS LVPIIRTVLG DAIEAGGSSL RDYRQTDGDL GYFQHRFRVY DRENAPCVTA GCPDVVRRVV QSGRSSFYCP SCQR
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