Gene Dshi_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3368 
SymbolubiE 
ID5712426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3541114 
End bp3541866 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID641269297 
Product2-polyprenylmethoxybenozoquinol methylase 
Protein accessionYP_001534702 
Protein GI159045908 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA GTACCGACAA AACCACGCAT TTCGGCTACC AGACCGTGCG CGAAGACGAC 
AAGGCCGGCT TGGTCCAAGG CGTTTTCACC AATGTGGCTT CGAAATACGA CATCATGAAC
GACCTGATGT CCGGAGGGCT GCACCGGGTC TGGAAGGATG CGATGATGGA CTGGCTCGCC
CCGCGGGCCG CTCAGCGGCT GCTCGACGTG GCGGGCGGGA CCGGGGACAT CGCGTTTCGC
TTCCTGAAGC GCGCACCCGA GGCCGAGGCG GTGGTGCTCG ACCTGACCGA GAGCATGTTG
ATTGCCGGAC GCCAGCGGGC GGAGGCCGAA GCGCTGGACG CCCGGCTGAA TTGGCTGGTC
GGCGATGCCA TGGCCTTGCC TTTCGCGGAT AACAGCTTTG ATGTCTACAC GATCAGTTTC
GGTATCCGGA ACGTGACCCG CATCCCGGAT GCCCTGGCCG AAGCCTACCG CGTGCTCCGC
CCCGGTGGGC GCCTGATGGT CCTCGAATTC AGCCAGTTGC CCAACCCCGG GTTGCAGAAG
GCCTACGATC TCTATTCCTT CAACGTGATC CCGCCCATGG GCAAGGTCGT CACCAATGAT
CGCGACAGCT ACCAGTACCT CGTGGAATCG ATCCGCCGGT TCCCCGACCA GGAGAGCTTC
GCGTCCATGA TCCGCACCGC CGGATTCGAT CAGGTCAAGT ATCGCAATCT GACCTTCGGG
GTGGCTGCGC TCCATTCCGG CTGGAAGCTC TAG
 
Protein sequence
MTESTDKTTH FGYQTVREDD KAGLVQGVFT NVASKYDIMN DLMSGGLHRV WKDAMMDWLA 
PRAAQRLLDV AGGTGDIAFR FLKRAPEAEA VVLDLTESML IAGRQRAEAE ALDARLNWLV
GDAMALPFAD NSFDVYTISF GIRNVTRIPD ALAEAYRVLR PGGRLMVLEF SQLPNPGLQK
AYDLYSFNVI PPMGKVVTND RDSYQYLVES IRRFPDQESF ASMIRTAGFD QVKYRNLTFG
VAALHSGWKL