| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3340 |
|---|
| Symbol | |
|---|
| ID | 5712398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3506634 |
|---|
| End bp | 3507257 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641269269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001534674 |
|---|
| Protein GI | 159045880 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1738] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTA TTCATCTGCC CGGCATCGTC GCCATGGCGG CCATCGTCGT CGCCTCCAAC
ATTCTCGTGC AATTCCTCTT CGGCAACTGG CTGACCTGGG GCGCGTTCAC CTATCCGCTG
GCGTTTCTGG TCACGGACCT GATGAACCGG CTCTACGGGG CGCAGGCCGC GCGTCGAGTT
GTGGCCGTGG GCTTTGCCGT CGGCGTGGTC TGCTCGTTGA TCGGCACGCA GATCATGGGT
GAATTCGGCC CGCTTGTGAC CCTGCGCATC GCCATCGGCT CGGGCCTCGC GTTTCTGACC
GCACAGCTTG TCGACATCGC CGTGTTCAAC CGGCTGCGCG AAGGCTCCTG GTGGCGGGCA
CCGCTGGCCT CCACCCTGGT GGGATCGAGC CTGGATACGG CAATCTTCTT CACCATCGCG
TTCTCAGGCG CCCTGACTTT CCTGGAACCG ACAAACGACG TGTCCTGGGC CGGAGAGGCG
GTGCCGCTGC TCGGTCTGGG GCCGGTCGCA CCGCTTTGGG TGTCGCTGGC CGTGGCGGAC
TTGATGGTCA AGCTGTCGCT CGCCATTCTG GCGCTCATCC CGTTTCGAGT GATTTTGCGC
CGCCTTCGCC CAAACCTAGC ATAA
|
|---|
| Protein sequence | MTRIHLPGIV AMAAIVVASN ILVQFLFGNW LTWGAFTYPL AFLVTDLMNR LYGAQAARRV
VAVGFAVGVV CSLIGTQIMG EFGPLVTLRI AIGSGLAFLT AQLVDIAVFN RLREGSWWRA
PLASTLVGSS LDTAIFFTIA FSGALTFLEP TNDVSWAGEA VPLLGLGPVA PLWVSLAVAD
LMVKLSLAIL ALIPFRVILR RLRPNLA
|
|---|
| |