Gene Dshi_3329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3329 
Symbol 
ID5712386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3493431 
End bp3494204 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID641269257 
Productenoyl-CoA hydratase 
Protein accessionYP_001534663 
Protein GI159045869 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC TTGTGACAGA GACCCGGAAC GGCACCCTGT GGGTGTCGTT CAACCGCCCC 
GAGGCGCGCA ATGCGTTGAC CTTCGGGATG TATGAAGGGC TGGCCGAACT GTGCCAGTCG
GTGCCCACCG ATGGGTCGGT GCGGGCAGTG GTGATCAAGG GCAATGGCGG CAAGGCCTTT
GCCGCCGGGA CGGACATGAC CCAGTTCCGG GCCTTCGAGA CAGCCGAGGA CGCCCGGAGG
TACGAAGGGC GGATCGAGGC GGTTCTGACC GCGGTGGAGA CCTGCCCCCT GCCGACGATT
GCCGCGATCC ATGGGGCTTG TACCGGGGGG GGCGCATCCA TCGCGGCGGT CTGCGACCTG
CGGATCACCA GCGGATCCTT GAAATTCGGC TTCCCGATTG CGCGGACGCT GGGCAATTGC
CTGGCGGCTG CAAACCTGGC GCGGCTCTCG GCGCTGATGG GCGCAGGCCG GGTGCGTGAG
ATGATCTTCA CCGCGCGGCT GATGGGGGCC GAGGAGGCGT TGTCGGTGGG TCTCGTGTCC
GAGGTTCTGG AGGATGAAGC GGCGGTATTG GCGCGGGCCG AAGAGTTGGC CGCACAGGTC
GGTGGCATGG CCCCCCTGAC CCTGCGCGCG ACCAAGGAGG CCATGCGCCG ACTCCAAGCC
GTGCAGTCCG CCGAGGACGG CGACCTGATC GAGATGTGCT ACATGAGCGC CGATTTCCGC
GAGGGGATGG AGGCGTTTCT GGGCAAGCGC AAACCGAGTT GGAGCGGGAC ATGA
 
Protein sequence
MTELVTETRN GTLWVSFNRP EARNALTFGM YEGLAELCQS VPTDGSVRAV VIKGNGGKAF 
AAGTDMTQFR AFETAEDARR YEGRIEAVLT AVETCPLPTI AAIHGACTGG GASIAAVCDL
RITSGSLKFG FPIARTLGNC LAAANLARLS ALMGAGRVRE MIFTARLMGA EEALSVGLVS
EVLEDEAAVL ARAEELAAQV GGMAPLTLRA TKEAMRRLQA VQSAEDGDLI EMCYMSADFR
EGMEAFLGKR KPSWSGT