| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3317 |
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| Symbol | serC |
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| ID | 5712374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3479701 |
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| End bp | 3480855 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269245 |
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| Product | phosphoserine aminotransferase |
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| Protein accession | YP_001534651 |
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| Protein GI | 159045857 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1932] Phosphoserine aminotransferase |
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| TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type
[TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.904643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG ACGCTCCGGT CACGCGGCCG GCAAACCCGC GTTTTTCCTC TGGCCCCTGC
GCCAAACCCC CCACATGGAC CCTCGATACG CTCGGCGACG CCGCCCTTGG CCGGTCGCAC
CGCGCCACTG TCGGCAAGGA CAAGCTGAAA GCCGCGATCG AGACCACGCG CGAGGTGCTG
GGCGTGCCTG CCGATTACAA GATCGGCATC GTGCCCGCCT CCGACACCGG CGCCTACGAG
ATGGCGATGT GGTCCCTGCT CGGCGAACGC CCGGTGGAAA TGCTCGCCTG GGAAAGCTTC
GGGTCCGGCT GGGTCACCGA CGCGATCAAG CAGCTCAAAC TGGACGCCAC CACCCGCACC
GCAGAGTACG GCGAGATCGT CGACCTGGCC GCGGTCGATT TCGACAAGGA CGTGTGCTTC
ACCTGGAACG GCACGACCTC GGGCGTGCGC GTCCCCGATG GCGACTGGAT CCCCGCCGAC
CGCGCGGGCC TGACGCTCTG CGACGCGACC TCGGCGGCCT TCGCCATGGA TCTGGCCTGG
GACAAGCTCG ATGCCACCAC CTTCAGCTGG CAGAAGGTGC TGGGCGGCGA GGCCGCACAC
GGCATCCTGA TCCTGTCCCC CCGCGCCGTC GCGCGCCTGG AATCCTACAC ACCGCCCTGG
CCTTTGCCCA AGATCTTCCG CCTGACCAAG GGCGGCAAGC TGATCGACGG GATCTTCCGG
GGCGAGACGA TCAACACGCC CTCGATGCTC TGTGTCGAGG ATTACCTCTT CGCGCTCGAC
TGGGCGAAAT CCGTGGGCGG CCTGCCGGGC CTGATCGCGC GGGCCGAGGC GAACACCGCC
GCCATCGCGG CCTTCGTGGC GGCTAACGAC TGGATCGACT TCCTGGCGGC GGACCCGGCG
ACACGCTCGA CCACCTCGGT CTGCCTGAAA TTCACCGACG ACCGGATCGC GGACGGGGCG
GCGTTCGCCA AGGCCGTGGC CAAGCGGCTG GAGGCCGAGG GCATCGCCTT TGACATCGGC
GCCTATCGCG ACGCCCCTCC GGGCCTGCGC ATCTGGTGCG GCGGCACGGT GGAGACATCG
GATGTCGAGG CCCTGCTGCC CTGGCTCTCC TGGGCCTTCG AGGCCGAGAT CGCCGCGCAA
CTGGCCGAAG CCTGA
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| Protein sequence | MALDAPVTRP ANPRFSSGPC AKPPTWTLDT LGDAALGRSH RATVGKDKLK AAIETTREVL
GVPADYKIGI VPASDTGAYE MAMWSLLGER PVEMLAWESF GSGWVTDAIK QLKLDATTRT
AEYGEIVDLA AVDFDKDVCF TWNGTTSGVR VPDGDWIPAD RAGLTLCDAT SAAFAMDLAW
DKLDATTFSW QKVLGGEAAH GILILSPRAV ARLESYTPPW PLPKIFRLTK GGKLIDGIFR
GETINTPSML CVEDYLFALD WAKSVGGLPG LIARAEANTA AIAAFVAAND WIDFLAADPA
TRSTTSVCLK FTDDRIADGA AFAKAVAKRL EAEGIAFDIG AYRDAPPGLR IWCGGTVETS
DVEALLPWLS WAFEAEIAAQ LAEA
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