| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3268 |
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| Symbol | |
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| ID | 5712325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3432733 |
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| End bp | 3433962 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269196 |
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| Product | putative coenzyme F420 hydrogenase |
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| Protein accession | YP_001534602 |
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| Protein GI | 159045808 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.96965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC AGACCCCGCC TGCCCTCTGG GCGCCGACAC CCGGCCCCGC GGCCCAGCGC
AAGCTGTGCA CCGATTGCGG GCTGTCACGG ACCAAGGATG CCGCGAAATG CGGACAGGCT
TGCCAGTTCA TCCAGCCGGA CTATCCGAAG ATGGAAGCGC AGGTGCATGG CCGGGCGCGG
GATCCCGGCC GGGGCGACGA GCAATTCTTC GGCCCCTACC GGCGGATGTA CCGCGCCGCC
CTGCACGCCC CCAAACCCGG CGCGCAATGG ACGGGGCTGA CCACGCGGCT TGCGCAAAAA
CTGCTGGAGG ACGGGGCGGT GGACGCGGTG CTCGGCATGG GGCCCGACCC CGAGGACAGC
TGGCGTCCGC GCCCGGTCAT CATCACCGAC CCCGCGGAGA TGGCCCATCT GCGCGGGATG
CGGATGGGGT ACGCGCCATT GCTGTCGCTG CTGGAGCCGG CGGCGAAAAC GGGTCTGCGG
CGCCTGGCGA TCATCGGCAT CCCCTGCCAG GTCTATGCCC TGCGCGCGAT GGAGGCGGAG
CTGGGGTTCG AGCGGCTCTA TGTCATCGGC ACGCCCTGTT CGGACAACAC CACGACCGAG
AACTTCCACC AGTTTCTCGC CCGCCTCTCG CCGCGGCCCG AGGACATCAC CTATCTCGAG
TTTCGCGCCG ATTACCATGT CGAGTTGCGC TTCATCGATG GCAGCCGCCG GGACATCCCG
TTTCTGAAAC TGCCCCTGTC GGACCTGCCC AACGATTTCT TCCCGATGAC CTGCCGGACC
TGTGTCGACT ACACCAATAC GCTGGCCGAT ATCACGGTGG GCTACATGGC GGGCGAGGGT
GACCAGTGGC TGATCGTGCG CAACGCGCGG GGGCAGGAGA TCCTCGACCG GCTGGGCGAC
GAGGTGCGCC TGGAAACGCC CGGATCGGCA GGCAAGCGGG CCGGGTCGGT CAAGGGGTTT
GCCGAGAACA CGGCGCGGGC CGCTGGCGGG CTGCCCCTGC GCAAGATGCC TGACTGGGCG
CGGGGGATCG TCGGCTGGCT GATGCCCAGG ATCGGACCCA AGGGGTTGGA ATTCGCGCGG
GCCCGGGTCG AGATGAAGGC GGTGGAGACG GTTCTGCACC TCCGCCGGGC GCACCCGAAA
CGGATGCGCG CGATGATCCC GGACCATGTC TGGCGGCTGG CAGAACCCTA TGGGCTGACA
CCGAAGCCGG GCGAGCGGTC GGAGGATTAG
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| Protein sequence | MLDQTPPALW APTPGPAAQR KLCTDCGLSR TKDAAKCGQA CQFIQPDYPK MEAQVHGRAR
DPGRGDEQFF GPYRRMYRAA LHAPKPGAQW TGLTTRLAQK LLEDGAVDAV LGMGPDPEDS
WRPRPVIITD PAEMAHLRGM RMGYAPLLSL LEPAAKTGLR RLAIIGIPCQ VYALRAMEAE
LGFERLYVIG TPCSDNTTTE NFHQFLARLS PRPEDITYLE FRADYHVELR FIDGSRRDIP
FLKLPLSDLP NDFFPMTCRT CVDYTNTLAD ITVGYMAGEG DQWLIVRNAR GQEILDRLGD
EVRLETPGSA GKRAGSVKGF AENTARAAGG LPLRKMPDWA RGIVGWLMPR IGPKGLEFAR
ARVEMKAVET VLHLRRAHPK RMRAMIPDHV WRLAEPYGLT PKPGERSED
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