| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3241 |
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| Symbol | lpcC |
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| ID | 5712298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3409201 |
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| End bp | 3410250 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641269169 |
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| Product | lipopolysaccharide core biosynthesis mannosyltransferase |
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| Protein accession | YP_001534575 |
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| Protein GI | 159045781 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGC GCCCGTCCCC CCGCGACCTC GATGTCATCG CGCCCAACCT CAAGCAGCGG
CTCTCGGGCG TGACCTCCAC GATCATCCGG CTGGTGCCGC TGCAGGCGCG CCAGATCGCC
ATCGCCGCGA CCGGGCCGGG CCTGCCCGAC CATGTCCCCC ATATCCCGCT CTCGGCGCTC
GTCACCCTGC CGCGGGACCG CTGGCGGGTC TGGCACGCGC GCCGCAATAC CGAGATGCTG
CTGGGGCTGG TGCTGCGTCA CGTGTTCCGC CGCAAGCTGC GGCTGCTCTT CACCACCGCC
TCCCAGCGGC AGCATTCGGC CTATACCAAG TGGCTGATCC GGCAGATGGA CGGGGTCGTC
GCGGTGTCGC GGAAATCCGC GGCCTATCTC GACCGGCCCG CCACGGTGAT CCTGCACGGG
ATCGACCTCG ACGACTTCAC CCCGCCCGCC GACAAGCCCG CCCTGCGCGC CCGCCTCGGC
CTCGATCCGA AGGCCACGCT GATCGGCTGT ATCGGGCGGA TCCGAGCGCA GAAGGGCACC
GATCTCTTCG TCGATGCCAT GCTGCGCCTT CTGCCCGACC GTCCCGGCGC CCAGGCCATC
GTGCTCGGCC GTGCCACCGA GGCGCACAAG GAGTTCCTTG CGGGCCTTCA ATCGCGCATC
GCCGCCGCCG GATTGTCCGA CCGCATCCAT TTCCCCGACG AGGTGCCCCC GGACCAGGTC
GCCGCCTGGT ACCAGGCGCT CGACCTCTAT GTCGCGCCGC AGCGGTGGGA AGGCTTCGGC
CTCACCCCGC TGGAGGCGAT GGCCTGCGCC GTGCCCGTGG TCGCCGCGGA TGTGGGCGCG
TTCTCCGAAC AACTCGACCC GCCCGAGATC GGCTTGCTCG TGCCCCACGA CGACCTTGCT
GCGCTCACCG CCGCCACCGA CGAGATGCTG GACCGCGATC TCGCCGCCGA GGGTGCGAAG
GCCCGCGCGA AGATGGAGGC GGAGTTCTCC CTCAGCCGCG AGGCCGAGGC CCTGATCGCC
GTCTACCGCG ACCTGCTCTC CCGGCCCTGA
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| Protein sequence | MSTRPSPRDL DVIAPNLKQR LSGVTSTIIR LVPLQARQIA IAATGPGLPD HVPHIPLSAL
VTLPRDRWRV WHARRNTEML LGLVLRHVFR RKLRLLFTTA SQRQHSAYTK WLIRQMDGVV
AVSRKSAAYL DRPATVILHG IDLDDFTPPA DKPALRARLG LDPKATLIGC IGRIRAQKGT
DLFVDAMLRL LPDRPGAQAI VLGRATEAHK EFLAGLQSRI AAAGLSDRIH FPDEVPPDQV
AAWYQALDLY VAPQRWEGFG LTPLEAMACA VPVVAADVGA FSEQLDPPEI GLLVPHDDLA
ALTAATDEML DRDLAAEGAK ARAKMEAEFS LSREAEALIA VYRDLLSRP
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