Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3161 |
Symbol | napC |
ID | 5712217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3325753 |
End bp | 3326466 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641269088 |
Product | cytochrome c-type protein NapC |
Protein accession | YP_001534495 |
Protein GI | 159045701 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATT CCCCCGAAAA AGATCCGCGT CGCAAAGGGC TCATGGGGCT TTGGGACCGG TTCTGGCTCC CCACCACGGT TTTCAGCGTG GGCTTCGTCC TGATCGGCGG CTTCGTTGCA GGTATCCTGT TCTGGGGCGG CTTTCACTGG ACGCTGGAGG CAACGAACAA GGAAGAGTTC TGTGTCTCCT GCCACACCAT GGAAACCAAT CTGGGCGAGT ACCGCGAGAC GATCCATTAC AACAACCACT CCGGGGTGCG GGCGGTCTGT GCGGACTGCC ACGTGCCAAA GGAATGGAAC CACAAGATGA AGGCCAAGAT CATCGCGGTG AAGGATGTCT ACCACGAAAT CGTGGGGACG ATCTCGACCC CCGAGGATTA CGAGGAGCAC CGCCTGGCCA TGGCGTCGGC CGTCTGGACG AAGATGAAGA AATCCAACAG CCGGGAGTGC CGCAACTGCC ACGAGTTCGA ATACATGGAC TTCACCCTGC AGGAAAACCG TGCCGCGGTT GAACACCAGA GGGCCATCGA CACCGGCATG ACCTGCATCG ATTGTCACCA GGGCATCGCG CACAGCCTGC CGCCCGGTCA CCTGGAGGAA TACCAGCGCA TCACCCGCGA ACTGGCAGGG CCGATGGCCA GCCATGCCGA CGAGCCGCTG GCAAGCAACA CCTCCCGTCT GCGCAACTAT CTGGACACAG CTCCGGCAGA CTGA
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Protein sequence | MADSPEKDPR RKGLMGLWDR FWLPTTVFSV GFVLIGGFVA GILFWGGFHW TLEATNKEEF CVSCHTMETN LGEYRETIHY NNHSGVRAVC ADCHVPKEWN HKMKAKIIAV KDVYHEIVGT ISTPEDYEEH RLAMASAVWT KMKKSNSREC RNCHEFEYMD FTLQENRAAV EHQRAIDTGM TCIDCHQGIA HSLPPGHLEE YQRITRELAG PMASHADEPL ASNTSRLRNY LDTAPAD
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