| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3145 |
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| Symbol | garL |
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| ID | 5712201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3312119 |
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| End bp | 3312880 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269072 |
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| Product | 2-dehydro-3-deoxyglucarate aldolase |
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| Protein accession | YP_001534479 |
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| Protein GI | 159045685 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.462882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGA ACAAGCTGCG AACGCTGCTG GCGCAAGACA CGCCGATCGT GAATGCCTGG
CTGTCGATCC CGTCGGGATA CGTGGCCGAG GGGGCGGGGC ACCAGGGGTT CGACAGCGTG
ACCGTGGACC TGCAACACGG GCTGATCGGG TTCGAGACCG CGGTCAGCAT GCTCCAGGCG
ATTTCGGCCA CGGAGGCGGT GCCGCTGGTG CGGTCGCCGT CGAAGGCGCC GGAGGTGATC
ATGCATCTGC TGGATGCGGG CGCCTACGGG GTGATCTGTC CAATGATCTC CACCCCGGAG
GAGGCCGCGG CCTTCGTCGC GGCCTGTCGC TATCCGCCGC AGGGCAGCCG GTCTTTCGGT
CCGGCACGCG GCAAGCTCTA TGGCGGGCCG GATTACTTCG AGGCGGCCAA TGCCGAGATC
CTGGCCATTC CGATGATCGA GACCGCCGAG GCCGTGGACA GGATCGAGGC CATCCTCGCC
GTGCCCGGTG TCGACATGAT CTATGTCGGG CCAAACGACC TGGCGCTCGA CCTGGGCGAG
GGGCCGGGGG CGGAGTGGCA TCCAAGGGCC ACCACCGACG CCATTGCCCA TGTGCTGGAC
CGGGCGCGCG CCGCCGGGGT GGCCACGGGT ATCTTCTGCG GCGATGGAGC CCTGTCGCGC
CAGCGGCTGG CGGAGGGGTT CGACCTGGTC ACCCCGGGCA ATGATTTCAA CCTGCTGATG
GGGGCCATGT CGGCCGCGAT CGCCGAAACC CGCCGACCCT GA
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| Protein sequence | MRPNKLRTLL AQDTPIVNAW LSIPSGYVAE GAGHQGFDSV TVDLQHGLIG FETAVSMLQA
ISATEAVPLV RSPSKAPEVI MHLLDAGAYG VICPMISTPE EAAAFVAACR YPPQGSRSFG
PARGKLYGGP DYFEAANAEI LAIPMIETAE AVDRIEAILA VPGVDMIYVG PNDLALDLGE
GPGAEWHPRA TTDAIAHVLD RARAAGVATG IFCGDGALSR QRLAEGFDLV TPGNDFNLLM
GAMSAAIAET RRP
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