Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3076 |
Symbol | greA |
ID | 5710928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3244630 |
End bp | 3245145 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641269003 |
Product | transcription elongation factor GreA |
Protein accession | YP_001534410 |
Protein GI | 159045616 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCTTG TTTCAGGTTT CGACTCGAAT TCTCAGGAAA GACCCATGGA AAAAATCCCC ATGACCCGCC GGGGTCATTC GGCGTTGGAT ACGGAGCTGA AACAGCTCAA GAGCGTGGAA CGCCCCGCCG TGATCCGGGC GATTGCCGAG GCGCGCGAGC ATGGTGACCT GTCCGAGAAT GCCGAGTACC ACGCCGCGCG CGAAAAGCAG AGCTTTATCG AAGGCCGGGT GAAGGAGTTG GAGGCGCTGT TGTCGCGCGC ACAAGTGATT GACCCCGCGA CCCTGTCGGG CGCGGTCAAG TTCGGCGCCA CCGTGACCAT CGTCGACGAG GACACGGACG AGGAGAAGAC CTACCAGATC GTGGGGGAGG CGGAGGCCGA TATCGAAAAG GGCCTGCTGA ACCTCAAATC GCCCATCGCC CGCGCCCTGA TCGGCAAGGA GGAAGGCGAC AGCGTCGAGG TCCGCACCCC GGGCGGCACG AAGTCTTACG AAATCCTCGA GATCGCGTAC AAGTAA
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Protein sequence | MVLVSGFDSN SQERPMEKIP MTRRGHSALD TELKQLKSVE RPAVIRAIAE AREHGDLSEN AEYHAAREKQ SFIEGRVKEL EALLSRAQVI DPATLSGAVK FGATVTIVDE DTDEEKTYQI VGEAEADIEK GLLNLKSPIA RALIGKEEGD SVEVRTPGGT KSYEILEIAY K
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