Gene Dshi_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3076 
SymbolgreA 
ID5710928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3244630 
End bp3245145 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content61% 
IMG OID641269003 
Producttranscription elongation factor GreA 
Protein accessionYP_001534410 
Protein GI159045616 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTTG TTTCAGGTTT CGACTCGAAT TCTCAGGAAA GACCCATGGA AAAAATCCCC 
ATGACCCGCC GGGGTCATTC GGCGTTGGAT ACGGAGCTGA AACAGCTCAA GAGCGTGGAA
CGCCCCGCCG TGATCCGGGC GATTGCCGAG GCGCGCGAGC ATGGTGACCT GTCCGAGAAT
GCCGAGTACC ACGCCGCGCG CGAAAAGCAG AGCTTTATCG AAGGCCGGGT GAAGGAGTTG
GAGGCGCTGT TGTCGCGCGC ACAAGTGATT GACCCCGCGA CCCTGTCGGG CGCGGTCAAG
TTCGGCGCCA CCGTGACCAT CGTCGACGAG GACACGGACG AGGAGAAGAC CTACCAGATC
GTGGGGGAGG CGGAGGCCGA TATCGAAAAG GGCCTGCTGA ACCTCAAATC GCCCATCGCC
CGCGCCCTGA TCGGCAAGGA GGAAGGCGAC AGCGTCGAGG TCCGCACCCC GGGCGGCACG
AAGTCTTACG AAATCCTCGA GATCGCGTAC AAGTAA
 
Protein sequence
MVLVSGFDSN SQERPMEKIP MTRRGHSALD TELKQLKSVE RPAVIRAIAE AREHGDLSEN 
AEYHAAREKQ SFIEGRVKEL EALLSRAQVI DPATLSGAVK FGATVTIVDE DTDEEKTYQI
VGEAEADIEK GLLNLKSPIA RALIGKEEGD SVEVRTPGGT KSYEILEIAY K