Gene Dshi_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3070 
Symbol 
ID5710922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3238074 
End bp3238844 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content73% 
IMG OID641268997 
Productmethyltransferase type 11 
Protein accessionYP_001534404 
Protein GI159045610 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCGG CCTGCGTTGA GACCTCGCTC GATGGGTTCC TCGGCGGACG GCTGGTGCTC 
GAACAACCCG TGCAGGGCTA CCGGGCCGGG ACCGACCCGG TGCTTCTGGC CGCCTCGGTG
CCCGCGCGGG CCGGGCAAAG CTGCCTCGAC CTGGGCTGCG GTGTCGGTGC GGCGGCCCTG
TGCCTGATGG TGCGCACGGG GGCGGCCTGC ACGGGGGTCG AGTTGCAACC GGGCTACGCC
GCCCTGGCGC GCGCCAACGC GTCCCGCAAC GACCTGCCCC TGGAGGTGAT CGAGGGCGAC
GCGACCGACC TGCCTCCCGA CCTGCGGCAG CGCAGCTTTG ACCACGTGTT CTTCAACCCG
CCCTATTTCG CCGCCGAGGC CAGTACCGCA CCGGCCGATG CGGGCCGCGA TCTCGCCCTG
CGGGACAGGG GGGATCTGAC CGACTGGCTG GCTGCGGCAG TCCGTCGCAC CAGGCCCCGG
GGAACGGTCA CCCTGATCGC CCGGACCGAC CGGCTGCCCG AGGTCATGGC GGCGGTGCCC
CGCGTGCTTG GCTCGCTGCG ATTGCAACCT CTGGTTGCGC GCGCGGGCCG TCCGGCCAAG
CGCTTTGTTT TGCAGGGCAT CAAGGAGGGC CGCGCCCCCT TCACCCTGCG TGCGCCGCTG
GTGCTCCATG ACGGATCGCG GCACCTGCGC GATGGCGAGG ACGGCTCGGA CATCGCCCGG
CACCTGCTGC GTGACGGTGG CGCGCTGTCG CTCTCCGACC CGGCCTGCTG A
 
Protein sequence
MPSACVETSL DGFLGGRLVL EQPVQGYRAG TDPVLLAASV PARAGQSCLD LGCGVGAAAL 
CLMVRTGAAC TGVELQPGYA ALARANASRN DLPLEVIEGD ATDLPPDLRQ RSFDHVFFNP
PYFAAEASTA PADAGRDLAL RDRGDLTDWL AAAVRRTRPR GTVTLIARTD RLPEVMAAVP
RVLGSLRLQP LVARAGRPAK RFVLQGIKEG RAPFTLRAPL VLHDGSRHLR DGEDGSDIAR
HLLRDGGALS LSDPAC