| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3064 |
|---|
| Symbol | tag |
|---|
| ID | 5710916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 3232657 |
|---|
| End bp | 3233226 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641268991 |
|---|
| Product | DNA-3-methyladenine glycosylase 1 |
|---|
| Protein accession | YP_001534398 |
|---|
| Protein GI | 159045604 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGC GTTGTGGATG GTGCGGGCAG GACCCGCTCT ATGTGGCCTA TCACGACACC
GAATGGGGCG TGCCCGACCG CGACCCCCGG GCCCTGTGGG AGAAACTGGT GCTCGACGGG
TTCCAGGCGG GCCTGAGCTG GATCACGATC CTGCGCAAGC GCGAGGCGTT CCGCGCCGCC
TTCGCCGGGT TCGACCCCGA GGTGATCGCG GGCTGGGGCC CGACGGAGGT GGAGCGCCTG
CTGCAAGACC CCGGCATCGT CCGCCACCGG GGCAAGATCG AGGCGACGAT CACCAATGCC
CAAGCCTATC TCGGGATCGA AGCCGCGCAG GGCTTCTCGC CCTACCTGTG GGGCTTCGTC
GGCGACGCGC CGCTGCAGAA CCGCTGGCAA AGCCTTGCGG AGGTGCCCGC CCAGACCGAT
ATCTCCCGCG CGCTGTCGCG CGACCTGAAG GCGCGCGGCT TCAAGTTCTG CGGGCCGACC
ATCGTCTATG CCTTCATGCA GGCGACGGGC ATGGTCAACG ACCACCTGGT CACCTGCCCC
TCCCACGCCC GCGTGGCGCG CCTCGCCTAG
|
|---|
| Protein sequence | MAERCGWCGQ DPLYVAYHDT EWGVPDRDPR ALWEKLVLDG FQAGLSWITI LRKREAFRAA
FAGFDPEVIA GWGPTEVERL LQDPGIVRHR GKIEATITNA QAYLGIEAAQ GFSPYLWGFV
GDAPLQNRWQ SLAEVPAQTD ISRALSRDLK ARGFKFCGPT IVYAFMQATG MVNDHLVTCP
SHARVARLA
|
|---|
| |