Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3030 |
Symbol | atpB1 |
ID | 5710882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3198004 |
End bp | 3198750 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641268957 |
Product | F0F1 ATP synthase subunit A |
Protein accession | YP_001534364 |
Protein GI | 159045570 |
COG category | [C] Energy production and conversion |
COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.311093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGACCG AAGAAGGCAC CGGCCTCACA TTCTATCCGA TGGATCAGTT CATCGTGTCT CCCCTGTTCG GGGATGGACC GGTGCACTTC TACACCCCGA CCAACGTGAC CTTGTGGATG GCCCTGGCCG TGGCGGCGAT CGCGCTTCTG CTGGTGGCGG GGACCCGCGG GCGCGCTGTG GTTCCGAGCC GGGCGCAGTC GATTGCCGAA CTGGCCTACG GGTTTGTCTA CAAGATGGTC GAGGACGTGA CCGGCAAGGA CGGGATCAAG TATTTCCCGT ATATCTTCAC GCTCTTCATG TTCATCCTGG TGGCCAACTT CCTCGGGCTG ATCCCGATGA GCTTCACCAC CACCTCGCAT ATCGCGGTGA CCGCGGTGCT GGCGCTGGCG GTGTTCATCA CCGTGACCGT GATCGGTTTC GTCAAGAACG GCGCGGGTTT CCTGAGCTTG TTCTGGGTGG CCTCCGCGCC CCTGGCGCTG CGCCCGATCC TCGCGGTGAT CGAGATCATC TCCTACTTCG TCCGTCCGGT CAGCCATTCC ATTCGTCTGG CGGGCAACAT GATGGCGGGC CACGCGGTTC TGAAGGTGTT CGCGGGCTTT GCCCAGGTGG CGGCCGTAGC CCCCATCGCG ATCATCGGCG TCATGGCGAT CTACGGGCTC GAAGTTCTGG TGTCGGCCAT CCAGGCCTAC GTCTTCACCA TCCTGACCTG CGTGTATCTC AAGGACGCAC TGCACCCGCA TCACTAA
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Protein sequence | MATEEGTGLT FYPMDQFIVS PLFGDGPVHF YTPTNVTLWM ALAVAAIALL LVAGTRGRAV VPSRAQSIAE LAYGFVYKMV EDVTGKDGIK YFPYIFTLFM FILVANFLGL IPMSFTTTSH IAVTAVLALA VFITVTVIGF VKNGAGFLSL FWVASAPLAL RPILAVIEII SYFVRPVSHS IRLAGNMMAG HAVLKVFAGF AQVAAVAPIA IIGVMAIYGL EVLVSAIQAY VFTILTCVYL KDALHPHH
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