Gene Dshi_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3013 
Symbol 
ID5710865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3182474 
End bp3182914 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID641268940 
Productprotein of unknown function DUF606 
Protein accessionYP_001534347 
Protein GI159045553 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.442084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.195062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATT GGCTGGCAAT CGGGGCGATT GCCCTTGGCG GTGCGGGCAT TGCCCTGCAG 
GCGCCGATCA ACGCGCAGCT GGCGCGGGCC TCCGGGGACC CGGTGGTGGC TGCGGCGATC
TCCTTCGGGG TGGGGTTCGT GGTGCTGTGC AGCATCGTCG CGGTGCGGGG CACCGTGCCC
GGCTGGAGCG CGATGGGCGG GCTGCCTTGG TGGGCCTGGT GCGGCGGAGC GCTGGGGGCG
GTCTATGTCT GGGCCGCGGC GTGGAGCGTG GACCGGATCG GGGTCGTTAC GCTGGTGGCG
GCGCTGGTCT TCGGGCAATT GCTGACAGCA TTGTTGCTGG ATGCCATCGG GGCGTTTGGC
ATGGCGATGC GCGAGGTGAG CCCGACGCGC ATCGCCGCCG TGGTTCTTGT CGGCGCCGGG
CTGCTTCTCT CACGGCTGTG A
 
Protein sequence
MTYWLAIGAI ALGGAGIALQ APINAQLARA SGDPVVAAAI SFGVGFVVLC SIVAVRGTVP 
GWSAMGGLPW WAWCGGALGA VYVWAAAWSV DRIGVVTLVA ALVFGQLLTA LLLDAIGAFG
MAMREVSPTR IAAVVLVGAG LLLSRL