Gene Dshi_2991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2991 
Symbol 
ID5710843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3155748 
End bp3156266 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content70% 
IMG OID641268918 
Productconserved hypothetical protein DUF1643 
Protein accessionYP_001534325 
Protein GI159045531 
COG category[S] Function unknown 
COG ID[COG4333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.47572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC GCACGCATCA AAAGGACGAC GCCGCCTCCA CGGCCGTCTA TTCCCCCTGC 
GAGCACTACC GTTACGCGCT GACCCGGACA TGGGACACGG ACGGGCGGCG CATCCTATTC
GTGATGCTGA ACCCCTCCAC CGCCACCGAG GTGCAGAACG ACCCCACGGT CGAGCGCTGC
GAACGCCGCG CCCGGGCCTT GGGCTATGGC GCGTTCCGGG TCTGCAACAT CTTCGCCTGG
CGCGACACCG ATCCCCGGGC GATGCGCGCG GCCCGCGACC CGGTGGGCCC AGGCAATGAC
GCGGCGATCA CCGACGGGGC CGCCTGGGCC GACGCGGTGC TTTGCGCCTG GGGCACCCAC
GGCGCGCATC TGGACCGCGG ACCGCAGGTC ACGCAGCTGC TGCGCGGCAC GGGCAAACCG
CTCTTGCACC TGGGGCTGAG CAAGGCGGGC CACCCCAAGC ACCCGCTCTA CATCGCCTAC
ACGCAACAGC CCGAACCGTG GGAGTTCCGC GATGATTGA
 
Protein sequence
MITRTHQKDD AASTAVYSPC EHYRYALTRT WDTDGRRILF VMLNPSTATE VQNDPTVERC 
ERRARALGYG AFRVCNIFAW RDTDPRAMRA ARDPVGPGND AAITDGAAWA DAVLCAWGTH
GAHLDRGPQV TQLLRGTGKP LLHLGLSKAG HPKHPLYIAY TQQPEPWEFR DD