| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2985 |
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| Symbol | |
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| ID | 5710836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3151506 |
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| End bp | 3152165 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268911 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_001534319 |
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| Protein GI | 159045525 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTGT CTTCGCGTCC CAACGATCCG GCCCCGGCGG CGCCCCATGT CCATGACCGG
GTGTACCGGT CCCTGCGCAC GCGGATCATG CATGGCGAGC TGGCGCCGGG CACACCGCTG
ACCCTGCGCG GGATCGGGCG GGAATACAGT GCGTCGATGA CCCCCGCGCG GGAGGCCGTG
CGGCGTCTGG CGGCGGAGGG GGCGCTGACC CTGACCGCCT CGGGCCGGGT GTCGACGCCG
GAGCTGTCGA ACGAGCGGAT CGAGGAGCTG GCGGCCCTGC GCGCGCTGCT GGAGCCGGAA
CTGGCGGCGC GGGCCCTGCC GCGGGCGCAC CTGGCGCTGA TCGAACGGCT GGAGATGATC
CAGGCGAGCA TCGCGCAATC CATCGCGCGG GAGGACGCGG TGGGCTATCT GCGGACCAAC
CTCGAATTCC ATCGGACCTT GTATCTACGG GCTCAGGCGC CCGCGATCCT GGCCATGGCC
GAGACCGTGT GGCTGCAACT GGGTCCGACC ATGCGCAAGC TGTACGGCCG GTTGCGGCGC
ACCGAGCCGC CGCATTTCCA CAAGCTGATG ATCGCGGCGC TGAAGGCGGG TGACGAGCCG
GGTTTGCGGT TGTCGGTGCG GATGGATGTG ACGCAGGGGC TGAAGCTGCT GGCGCAGTAG
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| Protein sequence | MLLSSRPNDP APAAPHVHDR VYRSLRTRIM HGELAPGTPL TLRGIGREYS ASMTPAREAV
RRLAAEGALT LTASGRVSTP ELSNERIEEL AALRALLEPE LAARALPRAH LALIERLEMI
QASIAQSIAR EDAVGYLRTN LEFHRTLYLR AQAPAILAMA ETVWLQLGPT MRKLYGRLRR
TEPPHFHKLM IAALKAGDEP GLRLSVRMDV TQGLKLLAQ
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