| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2959 |
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| Symbol | xdhA |
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| ID | 5710810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3123160 |
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| End bp | 3125505 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268885 |
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| Product | xanthine dehydrogenase molybdenum-binding subunit |
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| Protein accession | YP_001534293 |
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| Protein GI | 159045499 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
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| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0461211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG CCAAACCCCT GCCCCATGAT GCCGCCGCGC TCCATGTCAC CGGGGCGGCG
CGCTATGTCG ACGACATTCC CACCCCCGCC AATGCGCTGC ACCTGGCCTT CGGGCTGAGC
GAGATTGCCC ATGGGGAGAT CACCGCGATC GATCTCTCGG AGGTGCGCGC CGCCCCGGGC
GTGGTCGCGG TTCTGACCGC CGATGACCTG CCGCATCACA ACGACGTCTC CCCCTCGCCC
CTGCCGGAGC CGATGCTGGC CACGGGCCAG GTGCATTACG TTGGCCAGCC CATTTTCCTG
GTGGCCGCCG AGAGCCATCT TGCCGCGCGC AAGGCGGTGC GCCGGGCGAA GATCGTCTAT
GCGGAAAAAC CGGCGCTTCT GAGCATCGAC GACGCGCTTG CGGCCGGGGC GATCTTCGAG
GACGCCCCGC GCCATTACAC CAAGGGCGAT GCGGACGCCG CGCTCGCCGC GGCCCCGAAG
GTGATCGAAG GGCGGATCGA GATCGGCGGG CAGGAGCATT TCTACCTCGA AGGGCAGGCC
GCACTCGCCC TGCCGCAGGA AGGCGGCGAC ATGGTCGTGC ATTCCTCGTC CCAGCACCCG
ACCGAGATCC AGCACAAGGT GGCCGAGGCC CTGGGCGTGC CCATGAACGC CGTCCGGGTG
GAGGTGCGCC GCATGGGCGG CGGGTTCGGC GGCAAGGAAA GCCAGGGCAA TGCGCTGGCC
TGCGCCAGCG CGGTGGTTGC GGCCCTGACC GGACGGCCCG CCAAGATGCG CTATGACCGC
GATGACGACA TGGTCATCAC CGGCAAGCGC CACGATTTCC GCATCGACTA CAAGGTCGGC
ATCGACGAAG AGGGGCGCAT CCTCGGGCTC GCCTTCGAGC AATACTGCCG CTGCGGCTGG
TCGCTCGACC TCAGCCTGCC CGTGGCGGAC CGGGCGATGC TGCATGCGGA TAATGCCTAT
CATCTGGAGC ATGTCTCGAT CCGCTCCCAC CGGCTGCGCA CGAACACCCA GTCCAACACC
GCCTTTCGCG GCTTCGGCGG TCCGCAGGGC ATGGTCGGGA TCGAGCGGGT GCTCGATCAC
GTGGCCTTCG CGGTCGGGCG CGATCCGCTC GAAGTGCGGC GCCTGAATTA CTATGCCGAA
GCGGGGGGCT GTCTGCCCCC CACACCCCCC GAGGATATTT CCGGACCTGA GAAGGCAGAG
GCTCCGCCGG TTCAGACCAC GCCCTATCAC ATGGAGGTGG AGGATTTCAT CCTGCACGGG
CTGACGGATC GGCTGGCCGA GACAGCGGAT TACGGAGTGC GCCGGGCCGA GATCCGGGCG
TGGAATTCCG AAAGCCCGAT CCTCAAGCGC GGGATCGCGC TGACGCCGGT GAAGTTCGGT
ATCTCTTTCA CGCTGACCCA TCTCAACCAG GCGGGGGCCC TGGTGCATGT GTATACCGAT
GGCTCGATCC ACATGAACCA TGGCGGCACC GAGATGGGGC AAGGCCTGTT CCAGAAGGTC
GCACAGGTGG CCGCGGCCCG GTTCGGGGTC GATATCGGCG CGGTGAAGAT CACGGCCACG
GATACGGGCA AGGTGCCCAA CACCTCCGCC ACCGCGGCCT CGTCGGGCTC GGACCTGAAC
GGCATGGCGG TGCAGGCGGC CTGCGACACG ATCCGCGACC GGATCGCGGC CTTCCTCGCC
GAGGAGCATC AGGCCGATCC GGCCACGGTG CGCTTCGCGG ATGGTCTCGT CCATGTGGGC
GGCGCGACCT ACGGCTTCGC CGAGGCGGTG CAGAAAGCCT ACATGGCCCG GATCAGCCTG
TCGGCCACGG GGTTCTACAA GACGCCCAAG ATCGTCTGGG ACCGGATCAA GGGCACCGGG
CGGCCGTTTT TCTACTTCGC CTATGGCGCG GCAGTAACCG AGGTGGTGGT GGATACGCTG
ACCGGCGAGA ACCGCATCCT GCGCACCGAT ATCCTGCATG ATTGCGGCGC CTCCCTGAAC
CCCGCGCTCG ATATCGGGCA GATCGAGGGC GGTTATGTGC AGGGCGCGGG CTGGCTGACC
ACGGAGGAAC TGGTCTGGGA CGATCGGGGC CGGCTGCGCA CCCATGCGCC CGCCACCTAC
AAGATCCCCG CGACCGGGGA CACGCCGCCG GTATTCAACG TGGCGCTGTG GGAGGGAGAG
AACCGCGAAG AGACCGTGTA CCGCTCCAAG GCCGTGGGGG AGCCGCCGCT GATGCTGGGC
ATCTCGGCGC TCATGGCGCT GTCGGACGCG GTGGCCGCCT GCGGCGACGG GACGGTCTAT
CCCGCGCTGG ATGCGCCCGC CACGCCGGAG CGGTTGCTCT GGGCGATCGA GCGGGTGCGG
GCATGA
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| Protein sequence | MSVAKPLPHD AAALHVTGAA RYVDDIPTPA NALHLAFGLS EIAHGEITAI DLSEVRAAPG
VVAVLTADDL PHHNDVSPSP LPEPMLATGQ VHYVGQPIFL VAAESHLAAR KAVRRAKIVY
AEKPALLSID DALAAGAIFE DAPRHYTKGD ADAALAAAPK VIEGRIEIGG QEHFYLEGQA
ALALPQEGGD MVVHSSSQHP TEIQHKVAEA LGVPMNAVRV EVRRMGGGFG GKESQGNALA
CASAVVAALT GRPAKMRYDR DDDMVITGKR HDFRIDYKVG IDEEGRILGL AFEQYCRCGW
SLDLSLPVAD RAMLHADNAY HLEHVSIRSH RLRTNTQSNT AFRGFGGPQG MVGIERVLDH
VAFAVGRDPL EVRRLNYYAE AGGCLPPTPP EDISGPEKAE APPVQTTPYH MEVEDFILHG
LTDRLAETAD YGVRRAEIRA WNSESPILKR GIALTPVKFG ISFTLTHLNQ AGALVHVYTD
GSIHMNHGGT EMGQGLFQKV AQVAAARFGV DIGAVKITAT DTGKVPNTSA TAASSGSDLN
GMAVQAACDT IRDRIAAFLA EEHQADPATV RFADGLVHVG GATYGFAEAV QKAYMARISL
SATGFYKTPK IVWDRIKGTG RPFFYFAYGA AVTEVVVDTL TGENRILRTD ILHDCGASLN
PALDIGQIEG GYVQGAGWLT TEELVWDDRG RLRTHAPATY KIPATGDTPP VFNVALWEGE
NREETVYRSK AVGEPPLMLG ISALMALSDA VAACGDGTVY PALDAPATPE RLLWAIERVR
A
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