| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2958 |
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| Symbol | xghB |
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| ID | 5710809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3121712 |
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| End bp | 3123163 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268884 |
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| Product | putative xanthine dehydrogenase |
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| Protein accession | YP_001534292 |
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| Protein GI | 159045498 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
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| TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0528227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCA CGTTTCTTCT GAACGGAGAG ACCGTGCGCG TGGCAGACGA GGCGCCCACG
CGCACCTTGC TGGACTGGCT GCGCGAACGG CGCGGGCTGA CCGGCACCAA GGAAGGCTGC
AACGAGGGCG ATTGCGGGGC CTGTACGGTG ATCGTGAGCG ATGCGGACGG TCCGCGGACC
CTGAATGCCT GCATCCTGTT CCTGCCGCAA CTGCAGGGCA AGGCGGTGCG CACGGTCGAG
GGGATCAGCG GCCCGGATGG CAGCCTGCAC CCGGTGCAGG CGGCGATGGT GGCCCATCAC
GGCTCCCAAT GCGGGTTCTG CACCCCTGGC TTCATCGCGG CAATGGCCTG CGCCCACACG
AGGGGGGAAA CGGATCACGC CGACCAGCTG GCGGGCAACC TTTGCCGCTG CACCGGATAC
GCCCCGATCC TGCGCGCCGC CGAAGCCGCC GCCGAAGCCC CGGTGCCGGA CTGGATGGCC
GAGCCTGCCT TGCCGCATAT CCAGGAGGAC ACAAGCTTTA CCGCGGTCCG GGAGGACACA
AGCTTAAACG CGGTCCGGGA GGACACGACA GCGGGCGCGG AGGCGGGCGT GGATGCGCTC
TGGGCGCAGC CGCGCTCCTC CGACGCGCTC GCCGCATGGT ATGCCGAACA TCCCGACGCC
ACCCTCGTGG CCGGGGCGAC GGATGTGGGG CTGTGGGTCA CGAAACAGCT GCGCGAGCTC
GCCCCGATTG CCTTCCTGAA CCGCTGCGAC GACCTCAAGA CGATCGAGAC CACGGACACC
CACTGGCGGC TCGGGGCCAT GGTCACGATT TCCGCGCTGC TGGAAACCGT CCGAGCGGAG
CACCCGAGCT TTGCCGAGAT GCTGCGCCGC TACGGCTCGG TGCAGGTGCG CAACGCCGCG
ACCCTGGGCG GCAATATCGC CAACGGCTCG CCCATCGGGG ACAGCCCGCC GCCGCTCATC
GCGCTCGGCG CCACCCTGCA CCTGCGCAAG GGCGACAGCC GCCGCGAGAT GCCGCTCGAA
GACTTCTTCC TTGCCTATGG CAACCAGGAC CGCGCCCCCG GCGAATTCGT CGAGGCGATT
ACCATCCCGC GCGGCCACGA CGGCTTGCGG GTCTACAAGC TGTCGAAACG AATGGACCAG
GATATCTCCG CCGTCTGCGG CGCGTTCAAC ATCACCCTGG CCGAAGGCCG GGTGACCGGG
GCGCGCATCG CGTTCGGCGG CATGGCGGGC ACGCCCCACC GGGCCAAGGC TGTTGAAACA
GCCTTGATCT CCGCCCCCTG GTCGCTGGAG ACCGTCACCG CCGCCGCCGA GTGGATGGGC
GACGACTACG CGCCGATGTC GGATATGCGT GCCTCGGCGG CCTATCGGCT CCGGACGGCG
CAGAACATGC TGGTCCGCTA TTTCCACGAG ACCGAAGGCA CCCGAACCGA CCTGCGGGAG
GTGGCGTCAT GA
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| Protein sequence | METTFLLNGE TVRVADEAPT RTLLDWLRER RGLTGTKEGC NEGDCGACTV IVSDADGPRT
LNACILFLPQ LQGKAVRTVE GISGPDGSLH PVQAAMVAHH GSQCGFCTPG FIAAMACAHT
RGETDHADQL AGNLCRCTGY APILRAAEAA AEAPVPDWMA EPALPHIQED TSFTAVREDT
SLNAVREDTT AGAEAGVDAL WAQPRSSDAL AAWYAEHPDA TLVAGATDVG LWVTKQLREL
APIAFLNRCD DLKTIETTDT HWRLGAMVTI SALLETVRAE HPSFAEMLRR YGSVQVRNAA
TLGGNIANGS PIGDSPPPLI ALGATLHLRK GDSRREMPLE DFFLAYGNQD RAPGEFVEAI
TIPRGHDGLR VYKLSKRMDQ DISAVCGAFN ITLAEGRVTG ARIAFGGMAG TPHRAKAVET
ALISAPWSLE TVTAAAEWMG DDYAPMSDMR ASAAYRLRTA QNMLVRYFHE TEGTRTDLRE
VAS
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