Gene Dshi_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2920 
Symbol 
ID5710771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3078861 
End bp3079172 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID641268846 
Productchaperonin 10 Kd subunit 
Protein accessionYP_001534254 
Protein GI159045460 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.907264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.269903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA CACCGCTTCA TGACCGTGTT CTGGTCCGTC GCGTCGAAAG CGAAGAAAAA 
ACCGCAGGCG GGCTGATCAT CCCCGACAGC GCCAAGGAAA AGCCCGCCGA GGGCCTGGTG
ATCGCCGTTG GCGCAGGTGC CAAGGATGAC GATGGGGACC GGATCCCCAT GGACGTCAAG
GAAGGCGACA AGATCCTCTT CGGCAAGTGG TCCGGCACCG AGGTGACCGT GGACGGCGAA
GAGCTGCTGA TCATGAAAGA GAGCGACATT CTCGGGATCA TCACCGACGA AGCCGCGGCC
AAGGCCGCCT GA
 
Protein sequence
MAFTPLHDRV LVRRVESEEK TAGGLIIPDS AKEKPAEGLV IAVGAGAKDD DGDRIPMDVK 
EGDKILFGKW SGTEVTVDGE ELLIMKESDI LGIITDEAAA KAA