Gene Dshi_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2838 
Symbol 
ID5710689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2996802 
End bp2997257 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content67% 
IMG OID641268764 
Producthypothetical protein 
Protein accessionYP_001534172 
Protein GI159045378 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00794322 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGT TTCTCGTCGT GCTCGATGAC AGCCGCGAAT GCCTGAATGC CATGCGCTTC 
GCCGCCATGC GCGCGGCCAA TACCGGCGGC GGCGTGCAGA TCCTGTCGGT GATCCCGCCC
GATGAATTCA ACCACTGGAT CGGCGTGGGC GAGGTCATGC GCGAGGAAAG CCGCGAGCGC
ATCACCGCCC ATTTCGAGGT CTTCGCGAAA TGGATGCGCG ACAAGCAGAA TGTCGACCCC
GAACTGGTGA TCCGCGAAGG CGAGCCGGTG GACGAGATCC TCGCCCAGAT CACCGACGAC
CCGGAGGTCG GCGTGCTCGT GCTCGGCGCC GGGAGCGGGC GCAAGGGGCC CGGCCCGCTG
GTCTCGGCCC TGGTGAAATC CGCAGGCACC CTGCCCGTGC CCCTGACCAT CGTGCCGGGC
GAGCTGAGCA AGGACCAGCT GGAGGCGGTG TGCTGA
 
Protein sequence
MRKFLVVLDD SRECLNAMRF AAMRAANTGG GVQILSVIPP DEFNHWIGVG EVMREESRER 
ITAHFEVFAK WMRDKQNVDP ELVIREGEPV DEILAQITDD PEVGVLVLGA GSGRKGPGPL
VSALVKSAGT LPVPLTIVPG ELSKDQLEAV C