| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2836 |
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| Symbol | trpS |
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| ID | 5710687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2994331 |
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| End bp | 2995356 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268762 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_001534170 |
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| Protein GI | 159045376 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0141096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CTGCCAGCAG CTTCACCCCC CGGGTCTTTT CCGGCATCCA GCCCTCGGGC
GGGCTGACGC TGGGCAACTA TCTCGGCGCG ATCAAACGCT TCGTGGACAT GCAGGACAGC
GGCATCCAGA CCCTCTATTG CATGGTGGAC CTGCACGCGA TCACCGTCTG GCAGGACCCC
GCCGCCCTGA CCCGGAACAC GCGCGAGCTG GCCGCGGGCT ATCTGGCCGC CGGGATCGAC
CCCGCGCGCT CGATCCTGTT CAACCAGTCC CAGGTGCCGG AGCACGCGCA ATTGGGCTGG
ATCTTCAACT GCGTGGCGCG CATGGGCTGG ATGGGCCGGA TGACCCAGTG GAAGGACAAG
GCGGGCAAGA ACGCCGAGAA CGCGTCCTTG GGCCTTTTCG GCTACCCGGC GCTGATGGCC
GCCGACATCC TGGTCTACCA CGCCACCCAT GTGCCCGTGG GCGAGGACCA GAAACAGCAT
ATCGAGCTGA CCCGCGACAT CGCCGCGAAG TTCAACCATG ACTACGGCGT GGACTTTTTT
CCCATGACCG AGCCGGTGAT CGAGGGCGCG GCGACGCGCG TGATGTCCCT GCGCGACGGC
TCCAGGAAGA TGTCGAAATC CGACCCTTCG GACATGAGCC GGATCAACAT GACCGACGAT
GCCGACGCCA TCGCCAAGAA GATCCGCAAG GCCAAGACCG ACCCCGAACC CCTGCCCGAG
ACCGTCGAGG GGCTGAAGGA CCGCCCCGAG GCGCGCAACC TGGTGAACAT CTACGCCGCC
CTGTCGGACC AGAGCGTCGA GGCGGTGATC GCCGCCCATG CCGGCGCGCA ATTCGGCACG
TTCAAGCCCG CGCTGGTGGA CCTCGCCGTG GACAAGCTCG CCCCGATCTC CTCCGAGATG
GCCCGGCTGA TGGACGATCC GGCCGAGATC GACCGGCTGC TGGGCAAGGG CGCGGCCCAG
GCTCGCGAGA TCGCCACCCC GATCCTGCAA AAGACCTACG ACATCGTGGG CATGGTCCGC
AGCTGA
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| Protein sequence | MTEPASSFTP RVFSGIQPSG GLTLGNYLGA IKRFVDMQDS GIQTLYCMVD LHAITVWQDP
AALTRNTREL AAGYLAAGID PARSILFNQS QVPEHAQLGW IFNCVARMGW MGRMTQWKDK
AGKNAENASL GLFGYPALMA ADILVYHATH VPVGEDQKQH IELTRDIAAK FNHDYGVDFF
PMTEPVIEGA ATRVMSLRDG SRKMSKSDPS DMSRINMTDD ADAIAKKIRK AKTDPEPLPE
TVEGLKDRPE ARNLVNIYAA LSDQSVEAVI AAHAGAQFGT FKPALVDLAV DKLAPISSEM
ARLMDDPAEI DRLLGKGAAQ AREIATPILQ KTYDIVGMVR S
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