| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2834 |
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| Symbol | |
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| ID | 5710685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2991755 |
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| End bp | 2993359 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641268760 |
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| Product | putative virulence factor |
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| Protein accession | YP_001534168 |
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| Protein GI | 159045374 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00622591 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACCGA TCCGGCTGCT GGCGGGGTTC ATGACCGTGG GGCTGTGGAC CATGGGAAGC
CGGGTGCTGG GCTTCGTCCG CGATATCCTG ATCGCGGGGC TCCTGGGCGC GGGGCCGGTG
GCGGACGCGT TTTTCGTGGC GTTCTCCCTG CCCAACATGT TCCGCCGGTT CTTCGCCGAG
GGCGCGTTCA ACATGGCCTT CGTGCCCATG TTCTCCAAAC GGGTCCAGAG CGGCGACGAC
CCCGAAGGCT TCGCCCGCGA CGCCCTGTCG GGGCTGGGGC TGATCCTGAT CCTGTTCACC
CTGGTCGCCC TCGCGGCGAT GCCCTGGCTG GTGCTGGCCA TGGCGTCGGG GTTCGTCGGG
GACGCGCGGT TCGACCTGGC CGTGGGCTTC GGGCGGATCG TGTTCGTCTA CATCCTGTTC
ATCTCCCTCG CGGCGCTGCT GTCGGGGGTG CTGAACGCCA CCGGGCGCTT CGCGGCGGCC
GCCGCGGCAC CCATCCTGCT CAACGTGATC TTGATCACCG CGCTGCTGGT CGCCGAGACC
GGCGTGCTGG AAGAGGTGCT GATCCTCGGC GGGATCGGCG CGTTCGAGCT GGGCGAGATC
GCCGGGCTGC ACCACGGCAC CATGCTGGCC ATCGGCGTCG TGCTGGCCGG GATCGCGCAG
CTTTGGCTTC TGTGGCGCGC GGCGGCGAAG GCGGGCTTCC CGCTGCGCCC GCGCCGCCCG
CGCATGACGC CGGAACTCAA GCGGCTCGCC ATCATCGCCG CCCCCGCCGC CCTCGCGGGC
GGCGTGGTGC AGGTCAACCT GCTGGTGGGC CGCCAGGTGG CGAGCTTCTT CGACGGAGCC
ATCGCCTGGC TGAACTATGC CGACCGTCTC TACCAGCTGC CCCTGGGGGT CGTGGGTATC
GCCATCGGGA TCGTCCTGCT GCCGGACCTG TCGCGCAGGC TCCAGGCCGG CGATACCGCG
GGCGGGCAGG ACGCGTTCAA CCGCGCGGGC GAGATCTGCC TCGCCCTGAC CGTGCCCGCC
GCCGTGGCGC TGCTCTGCAT CCCCGAGGCG TTGGTCTCGG TCCTGTTCGA ACGCGGGCGC
TTCACCGCCG AGGACAGCGC CGCGACCGCG CTCGCCGTGG CGGTCTACGG GGTCGGCCTG
CCCGCCTTCG TGCTGCAAAA GGTGTTCCAG CCGCTGTTTT TCGCCCGCGA GGACACCCGC
AGCCCCCTGC GCTACGCGCT CTGGGCGATG GTCGTGAATG CCGGCATCGC GATCGGACTG
GCCCCGGTGA TCGGCTATGT CGCCGCCGCC CTCGGGGCGT CCCTGGCGGG CTGGGCGATG
GTCTGGCTGC TTTGGCGCGG CTCCCGCCCC CTGGGGGAGG CCGCGGCCTT CGACGCCCGG
TTCAAGGCGC GGATCGGACG GATCGTTCTG GCGGCCCTGG CCATGGGCGC GGTCCTGCTG
GGCGCGCAAG AGCTGCTGTC GGAAGCTTTG CGCACGCCCA CCCTGCGCTA CGGCGCGCTG
GCCGCCCTCG TGGCCCTCGG GATCGTCAGC TATGGCGCGG CCGGGCATCT GCTGGGCGCC
TTCCGGATGG CCGAGGTCAA GCGCGCCCTG CGCCGCGGGC CCTGA
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| Protein sequence | MKPIRLLAGF MTVGLWTMGS RVLGFVRDIL IAGLLGAGPV ADAFFVAFSL PNMFRRFFAE
GAFNMAFVPM FSKRVQSGDD PEGFARDALS GLGLILILFT LVALAAMPWL VLAMASGFVG
DARFDLAVGF GRIVFVYILF ISLAALLSGV LNATGRFAAA AAAPILLNVI LITALLVAET
GVLEEVLILG GIGAFELGEI AGLHHGTMLA IGVVLAGIAQ LWLLWRAAAK AGFPLRPRRP
RMTPELKRLA IIAAPAALAG GVVQVNLLVG RQVASFFDGA IAWLNYADRL YQLPLGVVGI
AIGIVLLPDL SRRLQAGDTA GGQDAFNRAG EICLALTVPA AVALLCIPEA LVSVLFERGR
FTAEDSAATA LAVAVYGVGL PAFVLQKVFQ PLFFAREDTR SPLRYALWAM VVNAGIAIGL
APVIGYVAAA LGASLAGWAM VWLLWRGSRP LGEAAAFDAR FKARIGRIVL AALAMGAVLL
GAQELLSEAL RTPTLRYGAL AALVALGIVS YGAAGHLLGA FRMAEVKRAL RRGP
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